Afipia carboxydohydrogena: AFIC_002095
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Entry
AFIC_002095 CDS
T08963
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00550
Peptidoglycan biosynthesis
pcax01100
Metabolic pathways
pcax01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFIC_002095
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AFIC_002095
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcax01003
]
AFIC_002095
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
AFIC_002095
Enzymes [BR:
pcax01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AFIC_002095
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AFIC_002095
Glycosyltransferases [BR:
pcax01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AFIC_002095
Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AFIC_002095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WEF50551
LinkDB
All DBs
Position
2166887..2169154
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AA seq
755 aa
AA seq
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MRKIVPSEWMQRIRNFFLDLDSRFDSTLFSSGRGLRELYERYSAFMDRFYVGRWKRWVFI
EPLSEMATIGLAGGILMLALAIPAFRETSDEDWLKKSDLAVTFLDRYNNPIGSRGIKHND
SIPLEDFPDHLIKATLATEDRRFYDHFGIDVAGTLRALVTNAQAGGVRQGGSSITQQLAK
NLFLSNERTIERKINEAFLAIWLETRLTKNEILKLYLDRAYMGGGTFGVDGAAHFYFNKS
ARDVNLAESAMLAGLFKAPTKYAPHINLPAARARANVVLDNLVDAGFMTEGQVFGARRNP
ASVVDRRDENSPNYFLDYAFDEVKKIVATFPKSYTERVFVVRTTIDMKVQKAAEDTVEDQ
LRQFGRDYHATQAAAVIADLDGGVRAMVGGRDYGASQFNRATDAMRQPGSSFKPYVYTTA
LLNGFKPTSVVVDGPVCIGNWCPQNYGRSYSGSITLTQALTHSINVIPVKLSIALGGKAG
PKAGRAKIVETARKFGIVTPLPDTPSLPIGADEVNVLEHTVAYATFPNRGKAVTPHAILE
VRTGAGDLVWRYDRDGPQPRQIIPPSVASDMAMMMSHVVSEGTARRAQLDGIPAAGKTGT
TNAYRDAWFVGYTGNFVGGVWYGNDDYSSTNRMTGGSLPAKTWHDIMEAAHQGIEIKELT
GVGAGQKLPKGSIAATNAPPKILDVAAGPPPTLTRRGVNTLVRIEKEMDEAAKTVPVGKT
SVNDGAPPAPHAALPFPDSFASANDATASMPPKKK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaagatcgtacccagcgagtggatgcaacggatccggaatttctttctggatctc
gattcgcgtttcgattccacgctgttctcctcggggcgcggcctgcgcgaactctatgag
cgctactccgcgttcatggaccgcttctatgtcgggcgctggaagcgctgggtgttcatc
gaaccgttgtcggagatggcgacgatcggcctggccggcggcatcctgatgctggcgctc
gcgatccccgccttccgcgaaacctccgacgaggactggctgaagaagtcggacctcgcg
gtgaccttcctcgatcgctacaacaacccgatcggcagccgcggcatcaagcacaacgac
tcgattccgctggaagacttccccgatcatctcatcaaggcgacgctcgccaccgaggac
cgccgcttttacgatcatttcggcatcgacgtcgcgggcacgctgcgcgcgctcgtcacc
aacgcgcaggcgggcggcgtgcgccagggcggctcctcgatcacccagcagctcgccaag
aacctgttcctgtcgaacgagcgcaccatcgagcgcaagatcaacgaggcgttcctcgcg
atctggctggagacgcgcctgaccaagaacgagatcctcaagctctatctcgaccgcgcc
tacatgggcggcggcaccttcggcgtcgatggggcggcgcatttctacttcaacaagtcg
gcgcgcgacgtgaacctcgccgaatccgcgatgctcgcgggcctgttcaaggcgccgacc
aaatacgcgccgcatatcaacctgcctgccgcgcgcgcgcgcgccaacgtcgtgctcgac
aacctcgtggatgcgggtttcatgaccgagggccaggtgttcggcgcccgccgcaacccc
gcctcggtcgtcgaccgccgcgacgagaactcgccgaactacttcctcgactacgccttc
gacgaggtgaagaagatcgtcgccaccttccccaaatcctataccgagcgcgtgttcgtg
gtgcgcaccaccatcgacatgaaggtacagaaggcggccgaggacacggtcgaagatcag
ttgcgccagttcggccgcgactatcacgcgacgcaggccgccgccgtgatcgccgatctc
gatggcggcgtgcgcgcgatggtcggcggacgcgactatggcgcgagccagttcaaccgc
gccaccgacgcgatgcgccagcccggctcctcgttcaagccctacgtctacaccacggcg
ctgctgaacggtttcaagccgacctccgtggtggtggacggcccggtctgcatcggcaac
tggtgcccgcaaaactatggccgctcctactctggctcgatcacgctgacgcaggcgctg
acccattcgatcaacgtcattccggtaaagctgtcgatcgcgctcggcggcaaggccggg
ccgaaggccgggcgcgccaagatcgtggagaccgcgcgcaagttcggcatcgtcacgccg
ctgcccgacaccccttcgctgccgatcggcgccgatgaagtcaacgtgctcgaacacacc
gtcgcctatgcgacgttccccaatcgcggcaaggcggtgacgccgcatgcgattctggaa
gtacgcaccggcgcgggcgatctggtctggcgctacgaccgcgacgggccgcagccgcgc
cagatcattccgccgtccgtcgcctccgacatggcgatgatgatgagtcacgtcgtttcg
gaaggcaccgcgcggcgcgcgcagctcgacggcattccggccgccggcaagaccggcacc
accaatgcctatcgcgacgcatggttcgtcggctacaccggcaacttcgtcggcggcgtc
tggtacggcaacgacgattattcctcgaccaaccgcatgacgggcggctcgctgcccgcc
aagacctggcacgacatcatggaagccgcgcatcagggcatcgagatcaaggaactgacg
ggcgtcggtgcgggtcagaaactgccgaaaggcagcatcgccgcaaccaatgccccgccg
aagattctcgatgtcgcagcaggaccgccgccgacgctgacgcggcgcggcgtgaacacc
cttgtccgcatcgagaaggagatggacgaggccgccaagaccgtgccggtgggcaagacc
tcggtgaacgatggcgcgccgcctgcgccgcacgccgcgctgccgttcccggacagtttt
gcctccgcgaacgacgcgacggcatccatgccgccaaagaagaaatga
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