Afipia carboxydohydrogena: AFIC_002157
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Entry
AFIC_002157 CDS
T08963
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K22705
hopanoid C-2 methylase [EC:2.1.1.-]
Organism
pcax
Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AFIC_002157
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GFIT
Motif
Pfam:
DUF4070
Radical_SAM
B12-binding
DUF364
Motif
Other DBs
NCBI-ProteinID:
WEF50612
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Position
complement(2230268..2231857)
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AA seq
529 aa
AA seq
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MKKLTGLAPRRILCVFPKYSPSFGTFEYAYPLTDGVKAFMPPQGLLLIAAALPESWSVRF
IDENIRAATDEDFEWAEAVFVSGMHIQRKQINDICRRAHEHDLPTALGGPSVSACPDYYP
EFDYLHIGEMGDATDDLFARLSADTTRPKRQVMLETHERLAMAEFPLPAYELIPLRKYFL
GSIQFSSGCPYQCEFCDIPGLYGRNPRLKSPQQVIAELDKMVENGLSGAVYFVDDNFIGN
RRAVLELLPHLVEWQKRNGYAVQFACEATLNIAKRPEILQLMHDAFFLTVFCGIETPDPN
ALKAMSKQHNMMVPILEGVETLNSYGLEVVSGIILGLDTDTDESGEGILEFIEQSQIPLL
TINLLQALPKTPLWDRLQRAGRLIENTERDSNVDFLLPYDRVVAMWRECMGRAYTPEKMF
ARFQHQIEHTYPNRIQPPPTKQRLTAANIKRGLTMVAKIIWHAGLRGDYRREFWRFAWPR
LKAGDVERFISCSLVAHHLITFARGASSGRQTASYYSDKPGEALPQAAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgaccggacttgcgccgcgccgcattctttgtgtttttccgaaatactcg
ccgtcgttcggcacgttcgaatatgcctatccgctgacggacggcgtcaaggcgttcatg
ccgccgcagggcctgctgctgatcgcggccgcgctgccggaatcatggagcgtgcgcttc
atcgacgagaacatccgcgccgccacggatgaggacttcgaatgggccgaagcggtgttc
gtctccggcatgcacattcagcgcaagcagatcaacgacatctgccgccgcgcgcatgag
catgatttgccgaccgcattgggcggcccttccgtcagcgcgtgccccgattattatccc
gagttcgactatctgcacatcggcgagatgggcgatgcgaccgatgatctgttcgcgcgc
ctcagtgccgataccacgcgcccgaagcggcaggtgatgctggagacgcacgagcgctta
gcgatggcggaatttccgctacccgcctatgaactcattccgctgcgcaaatattttctc
ggcagcattcagttttccagcggctgcccgtatcaatgcgagttctgcgacattccggga
ttgtacggccgtaatccgcgcctgaaatcgccgcagcaggtcatcgccgaactcgacaag
atggtcgagaacgggctgtcgggagcggtttatttcgtcgacgacaatttcatcggcaac
cgccgcgcggtgctggagctgttgccgcatctggtcgaatggcagaagcgcaacggctat
gcggttcagttcgcctgcgaggcgacgctgaacatcgccaagcggccggaaatcctgcaa
ctgatgcacgacgccttcttcctcaccgtgttttgcggcatcgagacgccggacccgaac
gcgttgaaggcgatgtcgaagcagcacaacatgatggtgccgatcctggagggcgtggag
acgctcaacagctacggtctggaggtggtgtccggaatcattctcggcctcgatacggat
acggatgagtcaggcgaggggattctcgaattcatcgaacagtcgcagattccgctcctg
accatcaatctgttgcaggcgttgccgaagacgccgctgtgggatcgcctgcaacgcgca
gggcggctgatcgagaacaccgagcgcgactccaatgtcgattttctgctgccctacgac
cgggtggtggcgatgtggcgcgaatgcatgggccgcgcctacacgccggaaaagatgttt
gcgcgcttccagcaccagatcgaacatacctatccgaaccgtattcagccgccgccgacg
aaacagcgcctcacggcggcgaacatcaagcgcggcctcaccatggtggcgaagatcatc
tggcacgcgggtttgcgcggcgactatcgccgcgaattctggaggttcgcatggcctcgc
ctgaaagcgggcgacgtcgagcgtttcatcagttgcagcctcgtcgcgcatcatctgatt
acgttcgcgcgcggtgcatccagtggccgccagaccgcttcctattattccgacaagccc
ggtgaggccttgccgcaggcggcggaatag
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