Afipia carboxydohydrogena: AFIC_002166
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Entry
AFIC_002166 CDS
T08963
Name
(GenBank) MexW/MexI family multidrug efflux RND transporter permease subunit
KO
K18307
multidrug efflux pump
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFIC_002166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002166
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_002166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WEF50621
UniProt:
A0ABY8BMA9
LinkDB
All DBs
Position
complement(2240732..2243815)
Genome browser
AA seq
1027 aa
AA seq
DB search
MVFTDIFIKRPILSLVVSLLILLIGFKAATSLPIRQYPKLSNTVVTVTTSYPGASPELMQ
GFITTPIEQAVASAEGVDYITSTSVQGVSTIQVYVRLNFDPNQALTEVLAKVNSVKYLIP
KESNDPVITKSTGQTTAVMYIGFASDELGGSAISDYLTRVIQPILSTVDGVASADILGGQ
TFAMRLWLDPARMAGRGVTAADVSSAIQSNNYQAAAGQTKGYFIVSNVTTNSDLSDVQAF
KRMVVKSKNGGLVRMEDIATVELAAQSNDSSVAMNGQHAIFIGVQSTPQGNPLTIVKGVR
ALFPEMERNLPPTLKMKVAYDSTKFIQSSIDEVEKTLGEAVVIVIVVIFLFLASLRSVII
PVVTIPLSLIGVCSLMLLAGFSINLLTLLAMVLAIGLVVDDAIVVVENIHRHLEEGKSPV
QASLIGAREIVGPVISMTITLAAVYAPIGFLGGVTGALFREFAFTLAGSVIVSGIIALTL
SPMMCSILLTHVEQGWFARKVDAIFRSVTDWYGNHLDRSLDYRPITALFAAVILFLVGFL
YTHSKAELAPEEDQGILFSLTKAPKYANIDYVNFYGDQLGNVFGSFPETDLTFVLNGTPV
ANQGIAGMILKPWDERKRSSTAMKQEVQNAVSKITGTQAFVFNLPALPGGPGGLPVQMVI
NSTSDFRQVYQEMEKLKAAARKSGLFIVSDSDLAFDQPVVRVNIDRNKANELGVTMSNIG
TTLAVALGGNYINRFNLQGRSYQVIPQVPRTLRLSPDALNGYYVAAANGDQIPLSTLVDI
KTGTDPNALTHFNQLNSATFQAVPMPGVTVGTAVDFLEKQAQQLPSGFGHDYLADARQYK
QEGNQLAVAFGFALIIIFLVLSAQFESIRDPLVILISVPMAISGALIPLFFGVATINIYT
QVGLLTLIGLISKHGILMVEFANELQLKEGLDRRAAIEKAARVRLRPILMTTAAMVTGLV
PLLTASGAGAASRFSIGLVVVAGMTIGTMFTLFVLPAVYTAIATDHSAHAISKRTKDIEA
FEASVAS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggtctttaccgacattttcatcaagcggccgatcctgtcgctggtcgtgagcctgctg
atcctgctgatcggcttcaaggcggcaaccagcctgccgatccggcaatatccgaaattg
tcgaacacggtggtcaccgtgacgacgagctatcccggtgcatcgcccgaattgatgcag
ggcttcatcacgactccgatcgagcaggcggtcgcatcggccgaaggcgtggattacatc
acgtcgacctcggtacaaggcgtcagcaccattcaggtgtatgtgcgcctcaacttcgat
ccaaaccaggcgctgaccgaagttctcgccaaggtgaactcggtcaaatatctcatcccc
aaggagtcgaacgacccggtcatcaccaagtccaccggccagaccacggcggtgatgtat
atcggcttcgccagcgacgaactgggcggctccgccatctccgactatctgacgcgcgtg
atccagccgatcctgtccacggtggatggcgtggcgtccgccgatattctcggtggccag
accttcgcgatgcgcctgtggcttgatccggcacgcatggcggggcgcggcgtcaccgcg
gcggatgtctcctcggcgattcagtccaacaactatcaggcggccgccggccagaccaag
ggctacttcatcgtctccaacgtcaccaccaactccgacttgagcgacgtgcaggcgttc
aagcgcatggtcgtgaagtcgaagaatggcggcctggtgcgcatggaggatatcgcgacc
gtcgagttggcggcgcagagcaacgattccagcgtggccatgaacggccagcacgcgatc
ttcatcggcgttcaatcgacgccgcagggcaacccgctgaccatcgtcaagggagtgcgc
gcgctgtttccggaaatggagcgcaatctgccgccgacgctgaaaatgaaggttgcctac
gattcgaccaagttcatccagtcatcgatcgacgaggtggaaaagacgctcggggaagcc
gtcgtcatcgtcatcgtggtgatcttcctgttcctggcctcgttgcgttcggtcatcatt
ccggtcgtcacgattccgctgtcgctgatcggcgtctgctcgctaatgctgctcgcggga
ttcagtatcaatctgctgacgctattggcgatggtgctcgccatcggtcttgtggtcgac
gacgccatcgttgtggtggagaatattcatcgccatctggaggaagggaagtctcccgtt
caggcgtcgctgatcggcgcgcgtgagatcgtcggtcccgtcatctcgatgacgatcacg
cttgccgccgtgtacgccccgatcggattcctcggcggcgtcaccggcgcgttgttccgg
gagttcgcgtttacgctcgccggctcggtgatcgtgtccggcatcatcgcgctgacgctg
tcgccgatgatgtgttcgattttgctcacgcatgtcgagcagggctggttcgcccgcaag
gtggatgcgatcttccgttccgtgactgactggtacggaaaccatcttgaccgctcgctc
gactaccggcccatcacggcgctgttcgcggcagtgatccttttcctcgtgggatttctc
tatacccactccaaggcggagcttgcgccagaggaagatcagggcatcctgttctcgctg
accaaggcgcctaaatacgcaaacatcgattacgtcaatttttacggcgatcagctcggc
aatgtgttcggcagctttcccgaaaccgacctgaccttcgtgctcaacggcacgcccgtg
gccaaccagggcatcgcgggcatgatcctgaagccgtgggatgagcgcaagcgctcctcg
accgcgatgaagcaggaagtgcagaacgcggtcagcaagatcaccggcacgcaggcattc
gtgttcaacctgccggcgctgccgggcgggccgggcggcctgcctgtgcagatggtgatc
aattccaccagcgacttccggcaggtctatcaggagatggagaagctcaaggctgccgcg
cgcaagagcggtctgttcattgtctcggacagcgatcttgccttcgaccagccggtggtg
cgggtgaacatcgaccgcaacaaggcgaacgagcttggcgtgacgatgtcgaacatcggc
accacgctggcggtcgccctcggcggcaattacatcaaccgcttcaacctgcaagggcgt
tcctatcaggtgatcccgcaggtgccgcgcacgcttcgcctgtcgccggacgctctcaac
ggatattatgtggcggccgccaatggcgaccagattccactctcgactctggtggacatc
aagaccggcacagatcccaacgcgctcacgcatttcaaccagctcaattcggcgaccttc
caggccgtgccgatgccgggcgtgaccgtgggtaccgcggtggatttcctggagaagcag
gcgcagcaactgccgtccggtttcggacacgactatctggcggatgcgcgtcagtacaaa
caggaaggcaaccagcttgcggtggcgttcggcttcgcgctgatcatcatcttcctggtg
ctgtccgcgcagtttgaaagtattcgcgatccgctggtgatcctgatctcggtgccgatg
gcgatcagcggtgcgctcatcccgctgtttttcggtgttgccacgatcaacatctacact
caggtcgggctgctgacgctgatcggcctcatcagcaagcacggcatcctgatggtggag
ttcgccaacgaattgcagttgaaggaagggctcgaccgtcgtgcggcgatcgagaaggca
gcgcgcgtccgtctccgcccgattctgatgacgacggcggcgatggtgaccggcctcgtc
ccgctcctgaccgcgagcggcgcgggcgcggcgagccgcttctccatcggcctcgtggtc
gtcgcgggcatgactatcggcacgatgttcacgctgttcgtgctgcccgcggtatacacc
gcgatcgcgaccgaccattcggcgcatgcgatctcgaagcgcaccaaggacatcgaggca
ttcgaggcgagcgtcgcctcctga
DBGET
integrated database retrieval system
