Afipia carboxydohydrogena: AFIC_002240
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Entry
AFIC_002240 CDS
T08963
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFIC_002240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002240
Transporters [BR:
pcax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AFIC_002240
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DctP
NMT1
UBM
Motif
Other DBs
NCBI-ProteinID:
WEF50692
UniProt:
A0ABY8BL35
LinkDB
All DBs
Position
complement(2328427..2329509)
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AA seq
360 aa
AA seq
DB search
MCRFVLRHLSDVVSRRPGNFPGSLLSLQSLGKGIGIAITLAVLGTPAHADETHTLRLSSW
GAPTAPQVSEFTAAFKTEVEKASGGRISVQTFPAGSLVNERAVPSAVQSGVVDISLTTMG
SWASIVPTAGALNTVFFRPTEKNFDKVIGPGTPLFKALDDDMAQHGTRLLAALYNGPVVV
VSKMPLKVPADFKGKTVRVFDRLTAEIVQSLKGAPSTIEVADVYPALQRGAVQAAIGGLE
GAIGLKEYEVGKYLLATNGQFGLLMTGYVMNKKSLDALPPDLQKIVLESGYKASRETTIA
MIAAYEKELHQMEEHGMTVTTLQPGTPEYQGFTDALASLAKTQEARFPAELVRQVLDAQH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgattcgttctacgccatctttccgacgttgtgagccgccgtccgggtaacttt
cccggcagccttttgtcgctgcaatcgctcggtaagggaattggaattgcaataacctta
gcggttctgggtacacctgctcacgcggacgaaacacatacgcttcgtctgtcgagttgg
ggtgctcctacagcgccacaagtttccgagttcacggcggctttcaaaaccgaggtcgaa
aaagccagcggcggccgtatttccgtgcagacattcccggcgggctcactcgtcaatgag
cgcgccgtaccgtctgccgttcaatccggtgtcgtcgatatttctctgaccacgatgggg
agttgggcatccatcgtccccacagccggagcattaaacacggtcttcttccgtccgacc
gagaaaaatttcgacaaggtcatcggacctggcacgcctttgttcaaggcgctggacgac
gatatggcccagcacggaacgcggttgctcgcggctctttataatggcccggtcgttgtc
gtctcgaagatgccgctgaaggtgccggctgatttcaagggcaagacggttcgcgtgttc
gaccgtctaacggcggaaatcgtgcagtcgttgaagggggcgccgtcgacaattgaagtg
gcggatgtctatcccgcacttcaacgcggtgcggttcaggctgcaatcggtggccttgaa
ggagccatcggcctcaaggaatacgaggtcggtaaatatctgttggcgaccaatggccag
ttcggtctgttgatgaccggctatgtcatgaacaagaagtcactggatgcgctgccgccc
gatcttcagaagatcgtgctggaaagcggttacaaggccagccgtgaaacaacgatcgcg
atgatcgcggcctacgaaaaagagcttcaccagatggaagagcacggcatgaccgtgacg
acgctccagccgggaacgcctgaataccaggggttcacggatgcgctggcatcacttgca
aagacgcaggaagcccgcttccccgccgagcttgtccgtcaggtgctcgatgctcaacac
tga
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