Afipia carboxydohydrogena: AFIC_002350
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Entry
AFIC_002350 CDS
T08963
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_002350 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcax01007
]
AFIC_002350 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcax03016
]
AFIC_002350 (glyS)
Enzymes [BR:
pcax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
AFIC_002350 (glyS)
Amino acid related enzymes [BR:
pcax01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AFIC_002350 (glyS)
Transfer RNA biogenesis [BR:
pcax03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AFIC_002350 (glyS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
WEF50800
UniProt:
A0ABY8BLB8
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All DBs
Position
complement(2432529..2434811)
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AA seq
760 aa
AA seq
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MPDLLFELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGLP
ARQPDLKEERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQKDPKKGDFYIALIEKTGRPA
IEVIAEILPVIVRTFPWPKQMRWGAGSATRGALTWVRPLHSIVATFGLETEDPDVVQFDV
GGIKAGQVTRGHRFMAPAEFSVRRFEDYVAKLEAAKVVLDPQRRKDIILADAKQLAFAQG
LELVEDEALLDEVAGLVEWPVALMGSFDQEFLSIPGEVIRATIRNNQKCFVVRDPKTGKL
APKFILVSNIEATDGGKAIVAGNERVIRARLSDAKFFYETDLKTKLEARLPKFDNIVFHE
KLGTQAERIARIESLAAELAPLVGADVEKTKRAAKLAKADLLTEVVGEFPEVQGLMGKYY
ALAQGEDASVAAAIEDHYKPQGPNDRVPTDPVAIAVALADKIDILTGFWAIDEKPTGSKD
PFALRRAALGVIRLIVENMVRMKIGPSIGRACRIQAEQLLDSGRAYYLFEDEIEGELVKG
YVSYKNELDDRNDERKTFLAIISDEGCDLSIDGIKFSNRQGLDTFGLDLLSFFADRLKVQ
LREQGARHDLVDAVFALEGQDDLLMVVRRVEALGKFLDTDDGKNLLAGTKRASNILAIEE
KKDKRSFTGAPEASLYRLDEEKNLARAIEQVKAEASAAVAKEDFAAAMGALAKLRPVVDA
FFDKVKVNDDDKAVRENRLKLLAEIREATRAVADFSKIQD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcttctctttgaattgttctccgaagaaattcccgcgcgcatgcaggcaaag
gcggcggacgatctgcgtcgcatggtgacggacaagctcgtcgccgaaggtctcgtctat
gaaggcgcgaaggcgttcgcgacgccgcgtcgcctcgcgctcaccgtgcacggtctgccc
gcgcgacagcctgatctcaaggaagagcgcaaggggccgaaggtcggcgcgccggatgcc
gccgtacagggcttcctcaaggcgacgggcctgaagtcgctcgacgaagcaaaaatccag
aaggacccgaagaagggcgacttctacatcgcgctgatcgaaaagacgggccgtcccgcc
atcgaggtgatcgcggaaattttgcccgtcatcgtgcgcactttcccgtggccgaagcag
atgcgctggggcgcgggctcggccacgcgcggcgcgctgacatgggtacggccgctgcat
tcgatcgtcgcgacgttcggtctcgagaccgaggacccggatgtggtgcaattcgatgtc
ggcggcatcaaagcggggcaggtgacgcgcggccacagattcatggcgcccgccgaattt
tcggtacgccgcttcgaggattacgtcgcgaagctggaagcggccaaggttgtgctcgat
ccgcagcgccgcaaggacatcattctggccgacgccaagcaactggcgttcgcgcaaggt
cttgagcttgtcgaggacgaggcgctgctggacgaagtggcgggtctggtcgagtggccg
gtcgcgctgatgggctcgttcgatcaggaattcctgtcgatccccggcgaggtgatccgc
gccaccattcgcaacaatcaaaagtgcttcgtggtgcgcgatccgaaaaccggcaagctc
gcgccgaaattcattctcgtgtccaacatcgaggccaccgacggcggcaaggccatcgtc
gcgggcaacgagcgcgtgatccgcgcgcggttgtctgacgcgaagttcttctacgagacc
gatctcaagaccaaactcgaagcgcggttgccgaagttcgacaatatcgtgttccacgaa
aagctcggcacgcaggcggagcgcatcgcgcgcatcgagagtttggctgcggagcttgcc
cctttggttggcgccgatgtcgagaagaccaagcgcgctgcaaagctcgccaaggcggat
ttgctcaccgaagttgtcggcgaattccccgaggtgcagggcctgatgggcaagtactat
gcgctggcgcagggcgaggatgcctctgtcgcggccgctatcgaggatcactacaagccg
cagggtccgaacgaccgcgtgcccaccgatccggtcgcgattgcggtggcgcttgccgac
aagatcgacatcctcaccggcttttgggcgatcgatgagaagccgacgggttcgaaggac
ccattcgcgctgcgtcgtgcggcgttgggtgtgattcggttgatagtagaaaatatggtc
cgcatgaaaattggaccctctattggtcgagcgtgcagaattcaagcagagcaactgctt
gatagcggtcgcgcttattatctttttgaggatgagatagaaggggagttagtaaaaggg
tacgtcagttataaaaatgagctggatgatcgaaatgatgaacggaagactttcttggcg
atcatatctgatgaagggtgtgatttaagtatcgatggaatcaaattttctaatcggcag
ggtctagatacatttggtcttgacctcctctccttcttcgccgaccgcctcaaagtgcag
ttgcgcgagcagggtgcgcggcatgatctggttgacgccgtgttcgcgcttgagggtcag
gacgatctcctgatggtcgtgcgacgcgtcgaggcgctcggcaaattccttgacaccgat
gacggcaagaacctgctcgcaggcacgaagcgcgcgtcgaatatccttgccatcgaagag
aagaaggacaagcgcagcttcaccggcgcgccggaggcttcgctctacaggcttgatgaa
gaaaagaatctcgcacgcgccattgaacaggtgaaggccgaggcgagtgccgccgtggcg
aaggaggatttcgcggccgcgatgggcgcgctcgcaaaactgcgacccgtcgtcgatgcg
ttctttgataaagtgaaggtcaacgacgacgacaaggcggtgcgcgagaatcgtctcaag
ctgctggccgaaattcgcgaggcgacgcgcgcggtcgcggacttctcgaagattcaggat
tga
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