Pseudomonas carboxydohydrogena: AFIC_002425
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Entry
AFIC_002425 CDS
T08963
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00730
Thiamine metabolism
pcax01100
Metabolic pathways
pcax01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AFIC_002425 (thiC)
Enzymes [BR:
pcax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AFIC_002425 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WEF50870
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Position
2511561..2513471
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AA seq
636 aa
AA seq
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MNKPITDIKAAVTTGPLPSSRKIFSTPETAPDLRVPLREIILSKNAGEPNLPVYDTSGPY
TDPNVLIDVNAGLPRTRMAWVKERGGIEEYEGREIKPEDNGNVGAKHAAAAFKAHHKPIR
GVGDAPITQLEFARAGIITKEMIYVAERENLGRKQQLERAEAARADGESFGAEVPLFITP
EFVRSEIARGRAIIPCNINHAELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVWAI
RWGADTVMDLSTGRNIHTTREWILRNAPIPIGTVPIYQALEKCDGDPVKLTWELYRDTLV
EQCEQGVDYFTIHAGVRLPYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEEIC
DLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTQIAWKKGCQVMIEGPGHVPL
HKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKE
HLGLPNRDDVKVGVITYKISAHASDLAKGHPAAQLRDDALSRARFDFRWEDQFNLGLDPE
TAVAYHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAASLGDNEKAALGLQAGMTI
KGTIEDGMAQMSEKFVKMGANVYVEADAVKDSNKAL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcccatcacagacatcaaggccgccgtcaccaccggtccgctgccgtcatcg
cgcaagattttctcgacgccggagaccgcgcccgatctgcgcgtgccgctgcgcgagatc
attctctcgaaaaatgcgggcgagccgaatctgccggtctacgacacctccggcccctac
accgatccgaacgtgctgatcgacgtcaacgccggtctgccccgcacccgcatggcgtgg
gtgaaggaacgcggcggcatcgaggaatatgaaggccgcgagatcaagccggaagacaac
ggcaatgtcggcgccaagcacgccgccgccgccttcaaggcgcaccacaagccgatccgt
ggcgtcggtgacgcaccgatcacccagctcgaattcgcccgcgccggtatcatcaccaag
gagatgatctacgtcgccgaacgcgagaacctcggccgcaagcagcaactggagcgcgcg
gaagccgcacgcgccgatggtgagtcgttcggcgccgaagtgccgctgttcatcacgccg
gaattcgtccgcagcgagatcgcgcgcggccgcgccatcatcccgtgcaacatcaaccac
gccgaacttgagccgatgattatcggccgcaacttcctcaccaagatcaacgccaatatc
ggcaactccgccgtcacctcgtcggtggaagaagaagtggacaagatggtgtgggcgatc
cgctggggcgcggacaccgtgatggacctctccaccggccgcaacatccacaccacacgc
gagtggatcctgcgcaacgcgccgattccgatcggcaccgtgccgatctatcaggcgctg
gagaagtgcgacggcgatccggtcaagctgacctgggagctttatcgcgacacgcttgtc
gaacagtgcgaacagggcgtcgattacttcaccatccacgcgggcgtgcgcctgccctac
atccacctcaccgccaaccgcgtcaccggcatcgtctcgcgcggcggctcgatcatggcg
aagtggtgcctcgcgcaccacaaggagagcttcctctacacccacttcgaggaaatctgc
gacctgatgcgcaagtacgacgtgtcgttctcgctcggcgatggtctccgtccgggctcg
atcgctgacgctaacgaccgcgcgcagttcgccgaactcgagacgctcggcgaacttacg
cagatcgcgtggaagaagggctgtcaggtcatgatcgagggccccggccacgtgccgctg
cacaagatcaagatcaacatggacaagcagctcaaggagtgcggcgaagctccgttctac
acgcttggaccgctgacgaccgacattgcgccgggctacgaccacatcacctccggcatc
ggtgcggcgatgatcggctggttcggctgcgcgatgctctgctacgttacgccgaaggag
catctcggcctgccgaaccgcgacgacgtcaaggtcggcgtcatcacctacaagatctcg
gcgcatgcctccgacctcgccaagggccacccggcggcgcaactgcgcgacgacgccctg
tcgcgcgcgcgcttcgacttccgctgggaggaccagttcaacctcggcctcgatccggaa
acagcggtcgcctatcacgacgagacgctgccgaaggaagcgcacaaggtcgcgcatttc
tgttcgatgtgcggaccgaagttctgctcgatgaagatcacgcaggacgtgcgcgactat
gccgcgtcgctcggcgacaacgagaaggccgcgctcggccttcaggccggcatgacgatc
aagggcaccatcgaggacggcatggcgcagatgagcgagaagttcgtcaagatgggcgcc
aacgtctatgtcgaggcggacgccgtgaaggacagcaacaaggcgctgtaa
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