Pseudomonas carboxydohydrogena: AFIC_002464
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Entry
AFIC_002464 CDS
T08963
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00500
Starch and sucrose metabolism
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AFIC_002464 (glgX)
Enzymes [BR:
pcax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
AFIC_002464 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
WEF50907
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All DBs
Position
2552054..2554126
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AA seq
690 aa
AA seq
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MRLTAGMHTRLGSTWDGRGTNFALFSANAEKVELCLFDSQGRREIERVTLPERTEDVWHG
YLNDVSPGQLYGYRVHGPYAPEQGHRFNCNKLLIDPYAKRLAGRLVWSDAHFAYRTGSAR
EDLSFDRRDNARGMPKAVVIDEAFNWGRRESRPNVAWADTIIYEAHVKGLTQTREDVPPH
LRGTFGALSCPAMVDHLKRLGVTTIELLPIHGFVDDRHLVEKKLSNYWGYNSIAFFAPEQ
RYANNGALDSFRTAVARLHDAGIEVMLDVVYNHTAEGNHLGPTLSFRGIDNLSYYWLMPD
NPRFYDDFTGTGNSLNLTHPRVLQMVMDSLRYWVEVCHVDGFRFDLASTLARGPNGFDRG
GAFLTAVRQDPVLASVKLVAEPWDVGLGGYQVGAFPSQWSEWNDRYRSTLRRYWAGEGSL
LGDLGRRMTGSSDLFNHDGRTPQASINHVTVHDGFTLMDLFSYNEKHNEANGEDNRDGSS
DNHSNNCGHEGPTDDPAIVALRRQLRKNQLACLLLAQGVPLLLAGDEAGNGQQGNNNAYC
QDNEIGWVNWNGVGQDGDDLTDFVGQLTALRGRFSQLRARQWVDGLKGDGSYGVLWLTPQ
ANEMVEADWNFPEGRFLSYVLGPKEHGAPPLFIVLNAAPEPIEFTLPKLPEYTKWSCVLD
TTTPGANGSVASGTTANAPPRSVLAFAGAA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaccgccggaatgcacacccgtcttggttcgacctgggacggccgtggcacc
aatttcgccctgttctccgccaacgccgagaaggtcgagttgtgcctgttcgacagtcag
ggacgccgcgagatcgagcgcgtcacgctccccgaacgcaccgaggatgtctggcacggc
tacctcaacgacgtctcgccgggccagctttacggctatcgcgtccacgggccctacgcg
cctgagcagggccaccgcttcaattgcaacaaactcctgatcgacccttatgcgaaacgt
ctcgccgggcgtctggtctggagtgatgcgcacttcgcctatcgcaccggcagcgcgcgc
gaggatctgtcgttcgaccgccgcgacaatgcgcgcggcatgccgaaggcggtcgtcatc
gacgaggctttcaactggggccgcagggaaagccgtcccaacgtggcatgggccgatacc
atcatctacgaggcgcacgtcaagggcctgacccagacccgtgaggacgtgccgccgcat
ctgcgcggcaccttcggcgcgctgtcgtgccccgcgatggtcgatcacctcaagcgcctc
ggcgtcaccaccatcgaactgttgccgatccacggcttcgtcgacgaccgtcatctggtc
gagaagaaactctccaactattggggctacaattccatcgccttcttcgcgccggagcag
cgctacgccaacaacggcgcgctggattccttccgtaccgccgtggcgcggctgcacgac
gccgggatcgaggtgatgctggatgtggtgtacaaccacaccgccgagggcaatcacctc
gggccgacgctgtcgttccgcggcatcgacaatctgtcctattactggctgatgccggac
aatccgcgcttctatgacgacttcaccggcaccggcaattcactgaacctcacccatccg
cgcgtgttgcagatggtgatggactcgctgcgctactgggtcgaggtctgtcatgtcgac
ggcttccgcttcgatctcgcaagcacgctcgcgcgcggaccgaacggattcgatcgcggc
ggtgcgtttctcaccgccgtgcggcaagacccggtgctggcctccgtgaagctcgtggcc
gagccgtgggatgtcggcctcggcggctatcaggtcggtgcgtttccctcgcaatggtcg
gaatggaacgaccgctatcgttcgacgctgcgccgctactgggcgggcgaaggcagcctg
ctcggcgatctcggccgccgcatgaccggctcctcggatttgttcaatcatgacggccgc
acgccgcaggcgagcatcaatcacgtcacggtgcatgacggattcacgctgatggacctg
ttcagctacaacgagaagcacaacgaggccaacggcgaggacaaccgcgacggctccagc
gacaatcacagcaacaattgcggccatgaagggccgaccgacgatccggccatcgtcgcg
ctgcgccgccagttgcgcaagaaccagctcgcctgcctgttgctcgcgcagggcgtgccg
ctgctgctcgcgggcgacgaagccggcaacggccagcagggcaacaacaacgcctattgt
caggacaacgagatcggctgggtgaactggaacggcgtcggacaagacggcgacgatctc
acggatttcgtgggtcaactcaccgcgctacgcggacgcttctcgcagttgcgcgcgcgc
cagtgggtcgatggcctgaagggagatggcagctacggcgtgctgtggctgacgccgcaa
gccaacgaaatggtggaagccgactggaattttccggagggccgattcctctcctacgta
ctcggcccgaaggaacatggcgcgccgccgttgtttatcgtgctgaacgccgcacccgaa
ccgatcgagttcaccttgccgaaattgcccgaatacaccaaatggtcctgcgtgctcgac
accaccacgccgggagcgaacggcagcgttgcatccggcaccacggccaatgcgccgccg
cgttccgtcctcgccttcgcgggggcggcatga
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