Pseudomonas carboxydohydrogena: AFIC_002496
Help
Entry
AFIC_002496 CDS
T08963
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
pcax
Pseudomonas carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcax03000
]
AFIC_002496
Transcription factors [BR:
pcax03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AFIC_002496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
HTH_20
TrmB
HTH_24
HbpS-like
DUF4423
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
WEF50939
LinkDB
All DBs
Position
complement(2589310..2590083)
Genome browser
AA seq
257 aa
AA seq
DB search
MDTTFLKGLRMLQALSLSDRPRGVTDLARELGLTKSNSHRLLKTLVHAGYAQNNSETAKY
SATLKVWELGSHVLSKVDVKSAASAYLQPLADKTGESVHLSLLVENSVVYIDKIDSAQPV
RAYSQIGKGAPAYCVATGKALLAFQGEDAIARVSEKLEVHTPRTITDSDEFKREMARVRQ
LGYAINRGEWREGVCGVGAPIRDSSRQVIAAVGISGPESRMKPTFMREQALIVIQTADLI
SKALGYPGDAVAYRKTA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggatacgacatttttgaaaggcctgaggatgcttcaggcattgtcgttgtcggacagg
ccgcgtggcgtgaccgatctcgcgcgtgaactcggcctgaccaaaagcaattcgcatcgg
cttctgaaaacgctggtgcacgccggttacgcgcagaacaattccgagacggcgaaatac
agcgccacgctgaaggtgtgggagcttggctctcacgtcctctcgaaagtcgatgtcaaa
agtgctgcgagtgcttatttgcagccgctggcggacaagaccggagagtcggttcatctt
tcgctgctggtcgaaaattccgtcgtttatatcgacaagatcgacagcgcccagcctgtg
cgtgcctacagccagattggaaagggtgcgcctgcttactgtgtcgcgaccggaaaggcg
ctgctcgcatttcaaggcgaggacgcgatcgcgcgtgtcagtgaaaagctggaggtccac
acgccgcgaacgattaccgattccgatgaattcaagcgcgaaatggcgcgggtgcgtcag
ctcggttatgcgatcaatcgcggcgaatggcgtgaaggcgtctgcggtgtcggcgcgccg
atccgcgattcgtcgcggcaggtaattgcggccgtcggcatctcggggcctgaaagccgg
atgaaacccacgttcatgcgcgaacaggcgctaatcgtcattcagaccgcagacttgatc
tcaaaggcgctcggttatcccggcgatgcggtcgcctatcgcaagaccgcttaa
DBGET
integrated database retrieval system
