KEGG   Afipia carboxydohydrogena: AFIC_002661
Entry
AFIC_002661       CDS       T08963                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
pcax  Afipia carboxydohydrogena
Pathway
pcax02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcax00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFIC_002661
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcax02022]
    AFIC_002661
Two-component system [BR:pcax02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   AFIC_002661
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 HTH_30 TraV
Other DBs
NCBI-ProteinID: WEF51095
UniProt: A0ABY8BM81
LinkDB
Position
2754006..2755514
AA seq 502 aa
MADTVPLPAILVVDDEQLSVEAIKRTLEDDFEVFTANSGPEALSVLENQWIQVILCDQRM
PGMSGLEVLSEARRRWPEVMRVIITGYTDPNDIINLVNEAGIYHFISKPWHPEELMLVLK
NGTQLYKLQREHDRLSVELKLLGPSVQNRLDEQRRQLRDGFNFDNIIRSPTSPLNAVCDM
AARIAGFDVPALILGETGTGKELIARAIHYCSLRSDKPFHAVNCGAIPSELLESELFGHR
KGAFTGAHAHRIGLLEQAHEGTIFLDEIGDIPQAFQVKLLRFLQEGEIRPVGSNSTQQVN
VRVIAATNRDLSREATAGKFREDLYYRLAISPISVPPLRERICDVPALANAMLERVTARH
DIKISGFTDEALDRLCAYPWPGNVRELENQITRMVILAEGRVLGPELIEPHILRADGATS
SPEPLVDRFISEGGLLRSRVERMEARIIRETLIRNRGNKSRAAEELGLSRVGLRAKLLRY
EIEEPTKLSLIRGDADGDDDEC
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggccgacaccgttccgcttcccgccattcttgtcgtcgatgacgaacaattatccgtc
gaggccatcaagcgcacgctggaggatgatttcgaggtcttcaccgccaatagcggcccc
gaggcgctgtcggtcctcgaaaaccagtggattcaggtcatcctgtgcgatcaacgcatg
ccggggatgtccggccttgaggttctcagcgaggcacgccggcgctggcccgaggtcatg
cgcgtcatcatcacgggatataccgacccgaacgacatcatcaacctcgtcaacgaggcg
ggcatctatcacttcatctccaagccatggcatcccgaagaattgatgctggtgctcaag
aacggcacgcagctctacaagctccagcgtgagcatgaccgcctttcggtcgagctcaag
ctgctcggcccctcggtccagaaccgcctcgacgagcagcgccgccagcttcgcgacggt
ttcaatttcgacaatatcatccgcagccccacctctccgctgaatgcggtatgcgatatg
gcggcgcgcatcgcgggcttcgacgtgccggcgctgatcctcggagagaccggcaccggc
aaggaactgatcgcccgcgccatccattattgcagccttcgctcggacaagccgttccat
gcggtgaattgcggcgcgatcccttccgaactgctcgagagcgaattgttcggccatcgc
aagggagctttcaccggggcccacgcgcaccgcatcggcctgctggagcaggcgcatgag
ggcacgatcttcctcgacgagatcggcgacattccgcaagccttccaggtcaagctgctg
cggtttttgcaggagggcgaaatccggcccgtgggcagcaacagcactcaacaggtcaat
gtccgcgtcatcgccgccaccaaccgcgacctctcgcgcgaggcgacggcggggaaattc
cgcgaagacctctactatcgcctggcgatttcgccgatttccgttcccccgctccgggaa
aggatttgcgacgttccagcactcgccaatgccatgctggaacgggtgacggcacgacac
gacatcaagatttccggcttcaccgacgaagcgctcgaccggctctgtgcctacccatgg
cccggcaacgtccgcgaactcgaaaaccagatcacaaggatggtcatcctcgcggaaggc
cgagtgctgggtcccgaactcatcgagccccatatcctgcgggccgatggcgccacttct
tccccggagccgctggtggatcgcttcatcagtgaaggtggcctgctgcgcagccgcgtc
gaaaggatggaggcccggatcatccgcgagacgctgatccgcaaccgcggcaacaaatcg
cgcgcggcggaggaactcggattatcccgcgtcggcctgcgcgccaaactgttgcgctac
gagatcgaagagccaaccaaattatcgcttatccgcggcgacgccgatggggacgacgac
gagtgttga

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