Afipia carboxydohydrogena: AFIC_002803
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Entry
AFIC_002803 CDS
T08963
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFIC_002803 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcax03019
]
AFIC_002803 (groL)
03110 Chaperones and folding catalysts [BR:
pcax03110
]
AFIC_002803 (groL)
03029 Mitochondrial biogenesis [BR:
pcax03029
]
AFIC_002803 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcax04147
]
AFIC_002803 (groL)
Enzymes [BR:
pcax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AFIC_002803 (groL)
Messenger RNA biogenesis [BR:
pcax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AFIC_002803 (groL)
Chaperones and folding catalysts [BR:
pcax03110
]
Heat shock proteins
HSP60 / Chaperonin
AFIC_002803 (groL)
Mitochondrial biogenesis [BR:
pcax03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AFIC_002803 (groL)
Exosome [BR:
pcax04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AFIC_002803 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AFIC_002803 (groL)
Exosomal proteins of breast cancer cells
AFIC_002803 (groL)
Exosomal proteins of colorectal cancer cells
AFIC_002803 (groL)
Exosomal proteins of bladder cancer cells
AFIC_002803 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8117
Motif
Other DBs
NCBI-ProteinID:
WEF51229
UniProt:
A0ABY8BNG1
LinkDB
All DBs
Position
2893098..2894750
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFSGDARERMLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
DIAVAAVIKDIEKRSKPVASSSEVAQVGTISANGDSTIGKMIAQAMQKVGNEGVITVEEA
KSLDTEVDIVEGMKFDRGYLSPYFVTNAEKMTAELDDAYILLHEKKLTGLQAMLPVLEAV
VQSGKPLLIVAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQL
ISEDLGMKLENVTLKMLGRAKKAVIDKENTTIVGGAGKKADIEARVNQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGTALL
RAKKAVGRINNDNSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILDNKTETFGFD
AQNEEYVDMVAKGIIDPTKVVRTALQDAASVAGLLVTTEAMVAELPKEAAPAMPGGGGMG
GMGGMGGMGF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgttaaattctcgggcgacgcgcgcgaacgcatgctgcgcggcgtc
gatatcctcgccaacgcggtgaaggtcaccctcggcccgaagggccgcaatgtcgtgatc
gacaagtcgttcggcgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatt
gaactcgaagacaagttcgagaacatgggcgcgcagatggtgcgcgaggtcgcttccaag
accaacgacctcgccggtgacggcaccaccaccgcgaccgtgctggcccaggcgatcgtg
cgcgaaggcgcgaagtcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacatcgccgtcgccgccgtcatcaaggacatcgagaagcgctccaagcccgtcgcgtcg
tcttccgaggtcgcccaggtcggcaccatttcggccaacggcgattccaccatcggcaag
atgatcgcccaggcgatgcagaaggtcggcaacgagggcgtcatcacggtcgaggaagcc
aagtcgctcgacaccgaggtcgacattgtcgaaggcatgaagttcgaccgcggctatctc
tcgccctacttcgtcaccaacgccgagaagatgaccgcagagctggacgacgcctacatc
ctgctgcacgagaagaagctcaccggcttgcaggccatgctgcccgtgctggaagccgtg
gttcagtcgggcaagccgctcctgatcgtcgccgaggacatcgagggcgaggcgctcgct
accctcgtcgtcaaccgcctgcgcggcggcctcaaggtcgcggccgtcaaggcaccgggc
ttcggtgatcgccgcaaggccatgcttgaggacatcgcgatcctcaccggcggccagctc
atctccgaagatctcggcatgaagctcgagaacgtcacgctgaagatgctcggccgcgcc
aagaaggcggtgatcgacaaggagaacaccaccatcgtcggcggcgccggcaagaaggcg
gacatcgaagcgcgcgtcaaccagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaagagcgtctcgccaagcttgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgagatcgaggtcaaggaaaagaaggatcgcgtcgaggacgcgctc
aacgcaacccgcgcggccgttcaggaaggcatcgtgccgggcggcggcaccgcgctcctg
cgcgccaagaaggctgtcggccgcatcaacaacgacaactccgatgtccaggctggcatc
aacatcgtcctcaaggcgctggaagccccgatccgtcagatcgcggagaacgccggtgtc
gagggctcgatcgtggtcggcaagattctcgacaacaagaccgagaccttcggcttcgac
gcccagaacgaggaatatgtcgatatggtcgccaagggcatcatcgaccccaccaaggtg
gtgcgcaccgcgttgcaggacgcagcctccgtcgctggtctcctcgtgaccaccgaagcc
atggtcgccgaactgccgaaggaagcagccccggcgatgccgggcggcggcggaatgggt
ggcatgggaggaatgggcggcatgggcttctaa
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