Afipia carboxydohydrogena: AFIC_002889
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Entry
AFIC_002889 CDS
T08963
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
pcax
Afipia carboxydohydrogena
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002889
Transporters [BR:
pcax02000
]
Other transporters
Pores ion channels [TC:
1
]
AFIC_002889
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
WEF51309
UniProt:
A0ABY8BMU9
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All DBs
Position
complement(2984029..2986167)
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AA seq
712 aa
AA seq
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MNQVVGDGAGVAGYQGSAQSGLSRFPTALLNTPQTVNVVSQQLMQDQRVTSVQEALRNVP
GITFTAGEGGVQGDNITIRGYSARNDFYRDGIRDPGWYARDAFSFDRVEVYKGPSSFLFG
RGSTGGVINIVSKTPQNRDFGVMEATGTSATGGRMMVDFNKVFGDFATRISAVGYDSDVA
GRDFVNTKRVGVAPSISYQIAPGTKNTLSYVYQKDDNIPDRGIVMLPGSYFGTSYRQPAP
VARNMWYGVMTPGQNDVEKTEAHNLINKFEHEFDSGLKFTNTTGVSYVERFNRTRPVQLS
GLGTANSNLWDAAVGGTRLGTPANPLLPGTSLSDVWVANTNHFQNQTNNLLVSNVSDLNA
RFRTGSLEHNVLLGVEVSHEKREHYRTTFSDTYRVNLANPNPWVTGTLSPTTSATEANAD
GVGVYVQDQLKITEWLELLGGVRFDNFSATSNGYTITRATGAQSGFTSLKNDNNFTTYRA
GVVLHPTPWSSVYYMRGTSANPTSEFVSLSNGQQSLAPVTSTIDEVGAKADILDKKLSLN
AALFRIRKENDYENRGTSAAPDYVAVGTTQVEGFEIGATGSITPQWSVSAGYAYLESKVL
NSNTVANIGHQLAMTPQNSFSLWSTYDLDPKWTIGGGAFYVDSRWSSAANDGRIPAYWRF
DAMAAYKVSRNFTLQFNIYNIADERYYDTAAGAGFAVPGPGRYVSLSGRVSF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaggtcgttggtgacggtgccggtgtcgccggttatcagggatccgcgcaaagc
ggattgtcgcgttttccgaccgctcttctgaacacgcctcaaacggtcaatgtcgtctcg
cagcaattgatgcaggaccagcgtgtcacctcggtgcaggaagccctgcgcaacgttccc
ggcatcacctttacggcgggcgagggtggcgttcagggcgataacatcaccatccgcggt
tacagcgcacgcaacgatttttatcgcgacggcattcgcgatccgggttggtatgcccgt
gatgccttcagcttcgatcgtgtcgaagtctacaagggtccgtcatcgtttctgttcggc
cgcggctcaaccggcggcgtcattaacatcgtttccaagacgccgcagaatcgcgatttc
ggggtcatggaagccacgggaacgtccgcgaccggcgggcgcatgatggtggatttcaac
aaggtattcggcgatttcgccacccgcatttccgccgtgggttacgatagtgatgtcgcc
ggccgcgatttcgtcaacaccaagcgcgtcggcgtcgcgccatcgatttcgtatcagatc
gcgcccggtaccaagaatacgctgagctacgtctaccagaaggacgataacattcccgat
cgcggtatcgtcatgttgccgggatcgtactttggcacgtcctaccggcagcctgctccg
gtggcgcgtaacatgtggtatggcgtgatgacgccgggccagaacgatgtcgaaaagacc
gaggcccataacctcatcaacaaattcgaacatgagttcgattctggattgaaattcacc
aacacgaccggcgtcagctatgtggagcgcttcaaccggacgcgtccggtgcagctgtcc
ggtcttggaacggccaactcgaatctctgggatgcggccgtcggcggcacccggctcggg
acgcctgccaacccgctgttgccaggtacgtcgctgagtgacgtatgggtggccaacacc
aaccacttccagaaccagaccaataatctcctggtcagcaacgtcagcgatctgaacgcc
aggttcaggacaggttcgcttgagcacaatgtccttctcggcgtcgaggtcagccatgaa
aaacgtgagcactatcgcacgaccttcagcgatacctatcgggtcaatctcgccaatccc
aacccctgggtgacgggcacgttgagccccacgacgtcggcgacagaagccaatgccgac
ggcgtcggcgtctatgtccaggaccagttgaagatcaccgaatggctggagctgctgggc
ggcgtccggttcgacaacttctcggcgacaagcaacggctacacgatcaccagagcgacg
ggcgcccagagcggcttcacctctctcaagaacgataacaacttcacgacctaccgtgcc
ggtgtcgtgcttcatccgacgccctggtcgtcggtctactatatgcgcggaacgtcggcg
aatccgacatcggagttcgtttcgctatcgaacggccagcagtcgcttgcgcccgtgaca
tcgacgatcgatgaagtcggcgccaaggccgacatcctcgataagaagctcagcttgaac
gccgcactgttccgcatcaggaaggaaaacgattacgagaaccgcggaacgagcgcggct
cccgattacgttgcggtgggaaccacgcaggtcgagggattcgagatcggggcgacgggc
agcatcacgccgcaatggagcgtctccgcgggttatgcctatctcgaatcgaaggtgctg
aattcgaacacggtcgccaacatcgggcatcagcttgcgatgactccgcagaactcgttc
tcgctgtggtcgacctatgatctcgatccgaaatggacgatcggcgggggcgccttctat
gtcgactcgcgctggagcagcgccgctaacgacggtcgtatcccggcatattggcgattt
gatgcgatggcggcctacaaggtcagccgcaacttcacgcttcagttcaatatctacaat
atcgccgacgagcgttactacgatacggctgccggtgcgggatttgcggttccgggcccc
ggacgttacgtctcgctctcgggccgcgtatcgttctaa
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