Persicimonas caeni: FRD00_01610
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Entry
FRD00_01610 CDS
T06769
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRD00_01610 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_01610 (xth)
Enzymes [BR:
pcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FRD00_01610 (xth)
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FRD00_01610 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF4880
Motif
Other DBs
NCBI-ProteinID:
QED36035
LinkDB
All DBs
Position
401065..401853
Genome browser
AA seq
262 aa
AA seq
DB search
MNIYSWNVNGLRACTRKGFVDWLHGSDAHIVGVQEIRALEEQLPKKVREPENWHTHFFPA
ASKKGYSGVGLFSTVEPDQVLTSVDEERFDREGRVQIAQYGKLKVLNVYFPNGSGKNRDL
SRIPYKLDFYNHLLDMLQPAVDRGERIIVMGDFNTAHKEIDLARPKDNTETSGFRPEERE
AFEDWLDAGWTDTFRHFCDEPERYTWWTYRGNCRERNVGWRIDYALASPAAMEFVVDADI
HHDVMGSDHCPLSVTLRRDVLG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ctgaatatctactcgtggaacgtcaacggccttcgcgcctgcacccgcaagggatttgtc
gactggctgcacggctccgacgcccacatcgtgggggtccaggagatccgcgcgctcgaa
gagcaactccccaagaaggtgcgtgagcccgagaactggcacacccacttctttccggcg
gcctccaagaagggctatagcggcgtggggctcttctcgacggtcgagcccgatcaggtg
ctcacctcggtcgacgaggagcgcttcgatcgtgaaggccgcgtccagatcgcccagtac
ggcaaactgaaggtcctcaacgtctacttccccaacggaagcggcaagaatcgcgacctg
agccgcatcccctacaagctcgacttctacaaccacctgctcgacatgctccagccggcg
gtcgaccgcggcgagcgcatcatcgtgatgggagatttcaacaccgcccacaaagagatc
gacctggcgcggcccaaggacaacaccgagacgagcggattccggcccgaggagcgcgag
gcgttcgaagattggctcgacgccggctggaccgacacgttccgtcatttctgtgacgag
cccgagcgctacacctggtggacctaccggggcaactgccgcgagcgaaacgtcggctgg
cgcatcgactatgcgctcgcctcgccggctgcgatggagttcgtcgtcgacgccgacatc
caccacgacgtgatgggctcggaccactgtccgctgagcgtcacgcttcgacgcgacgtg
ctcggttga
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