Persicimonas caeni: FRD00_02405
Help
Entry
FRD00_02405 CDS
T06769
Name
(GenBank) diguanylate cyclase
Organism
pcay
Persicimonas caeni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Pkinase
PK_Tyr_Ser-Thr
GAF_3
AAA_16
GAF
GAF_2
TPR_12
ABC1
Kdo
TPR_7
FTA2
TPR_2
APH
TPR_14
AAA_22
Pkinase_fungal
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QED30853
LinkDB
All DBs
Position
complement(611490..616898)
Genome browser
AA seq
1802 aa
AA seq
DB search
MSQTATHDIVESLEIPGVDLLEEVGRGAHSAVYRARMGDEVCAVKVRRHITDADASRHTL
RYRTEAAVLARFSHPGLARIIEAGETTREGRPYLIMEFVDGATLADTIDRRGPLGQTLVV
DIACTLAAALGEVHRHGVIHRDIKPGNILLRAGDGAVKLIDFGFAARATGVDPDRAVVGT
LRYSAPEQTGMLQRPVDARSDLYSLGVVLYECATGRPPFDAAEPAELVRQHAVDKPAPVR
QMVPEISPALAHIIEKLLAKDPDDRYGSCAALVADLERLDSLDAAYADGDALELGHREER
SQRHHSTPLVGRHRECRRLESAWLQARSGRGNICWLTGVPGAGTSRLVDEFLAQESGSSA
FALSVRCAQTPKTPFGAVQRAGENFIRILRNLDPQDLSAWTSHIEQASQEHMPLLAQLTA
SAFDLPDVSKRFVAEDSGSPTRFAEATASFFLQLATADWPMVFVVDGIEHIDDASLQVLR
QVAARVQNHHLLLVLTATEAPDSDSGPEAFLEDVANLPLQHLRIGPLDEEAVSELVASEL
GGDGLPVRVVRQITARTQGVPLAVREYLFSMLEAGVLRPTRDGWWVDTAGLASLDLPADV
TLLMLRRIEELGDEPRSVLRAAAIEGQHFHIGLCSEYSGVDEGGVSEAVAHGIQLRLVEH
VKEDIYAFVHRRIRSALADELDESSRRAVHQRIAEVLDDSQANGDAHLFSLARHYANGQV
DSNRQRVYETNLHAGLLALRKHAFEEAYNFLLTARLHSPGEVDAQLLRALGEACAATGRV
SEAIRLFENAVALASSDVERARLHARIARVYMAVLEMDEAWAQIQLALDHVDGKMPTTTA
ARGFGTVLAWLMAWLAARFPSKARTHDAAASATMRLRAHLYEIGAITAFFRLDYDLMGGL
VIRALRIARRLPDCAEKAQAFSTYGAVLAILGRHATAEEYATRAIEIAEALDDREVLARA
RWFESTTYEFSGDARRAETLLRQTLREHGLWLELWEYVTVCGELGGLLLDRGFVHEAGSW
GKKILERTDDTACHGELVHMERVYGLYLEAAARAWGGKGIEAHAFVEQARRLLEGRVQVG
LGEASAVGYELAVHYELGNRGKDVEKLLAKWKRFELVPDRSPHQIRRFYIYQAYLRLDQF
RYAREFDQRAARARFLEALDELKLAADTPKYATHLYVIQSDWEALNGQDERAGWLLSRAD
EVADLANSPWGNFEVALRRARRLKRQGNERAALRRARYAHSLASEYGWSHRARDVRNEFE
FYVDPSSSTTTTSRSRGHSHSASEGSTDAQSLKLERYLDSLMEVAIASGTVFDPREQARV
ALDEIVRIFGAERAFLFGGERIDELDVIAGRDVRGRDLGDRGDYSSSVVERVCRERRSIV
STGSDEGDVLSSASAVHHNLRSIMAGPVQIQDRFLGVVYVDSRIARGVFAPDDAEILMAI
SSHIGIAQETARAAQLEVDIESERKKRELAEVIRHTTAAMTSTLDQSEVLERLLEGVGQL
VVADRAVAFLLDGDQLELFVELGDGGATVGEASEWIFGDPRIERVMETVEPQVSSDGDDL
GGTFSHADEGYSWMGVPIVSREQLAGMILLERDEDDAYGPDHVQLALALAGQAGIAIENA
RLFAQVERLAILDDLTGLPNRRRLFEVAEAEFSRARRYAKPLSAIMLDIDHFKKVNDTYG
HAIGDEILRAVAHRCDDALRETDTIGRYGGEEFVVIMPETSLDEASQCVAERLRTAVADA
SIVTDRGEVSVTISLGVAELTPADEDVDSLLNRADEALYRAKEGGRNRVEVALSCTDTAS
HS
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacggcgacgcacgacatcgtcgagtccttggagatccccggggtcgacctc
ctcgaagaggtcggccgcggggctcacagcgcggtgtatcgggcgcgcatgggcgacgaa
gtctgcgcggtcaaggtgcgccgccatatcaccgacgctgacgcctcccgccatacgctg
cgctaccgcaccgaggccgccgtcctcgcccgcttctcacacccggggctcgcccgcatc
atcgaggccggcgagaccacgcgcgaaggacgcccatacctcatcatggagttcgttgac
ggggcgacgttggccgacacgatcgaccggcgagggccgctcggacagacgctggtcgtc
gatatcgcgtgcacgctggccgcagcgctcggcgaggtgcatcgccacggcgtcatccac
cgcgacatcaaaccgggtaatatcctgctgcgcgccggcgacggcgccgtcaaactcatc
gacttcggtttcgctgcgcgcgccaccggtgtcgaccccgaccgcgccgtcgtcggcacc
ctgcgctacagcgcgcccgagcaaaccggcatgctccaacgccccgtggatgcgcgctcc
gacctctactccctcggcgtcgtcctctacgaatgtgccaccggccgtccgccgttcgac
gccgccgagcctgccgaactcgtacgtcaacacgccgtcgacaagccggcgcccgtgcgt
cagatggtccccgaaatttcaccggcgctggcgcacatcatcgaaaagttgttggccaaa
gaccccgacgaccgctacggctcgtgcgccgcgctcgtggccgatctggagcgcctcgac
tcactcgacgccgcatatgccgacggtgatgccctcgaacttggccaccgcgaggaacgc
agccaacgccaccactcgaccccgctcgtcggtcgccaccgcgagtgccgccgcctcgaa
tcggcttggctccaggcgcgcagcggccgcggcaatatctgctggctcaccggcgtgccc
ggcgcaggcacctcgcggctcgtcgacgaatttttagcccaggagagcggcagttcggcc
tttgccttgtccgttcgctgcgctcagacccccaagacccctttcggcgctgtccaacgc
gccggcgagaacttcatacggatcctgcgaaacctcgacccacaggacctgtcggcctgg
acctcccatatcgagcaggcaagccaagagcacatgcctttgctggctcaattgaccgcc
agcgccttcgacctgcccgatgtttccaagcgctttgtcgccgaggattcaggctccccg
acgcgctttgccgaggcgaccgcctccttctttttgcagcttgcgactgccgactggccg
atggtcttcgtggtcgatggcatcgagcacatcgacgacgccagcttacaggtgctacgt
caggtcgccgcgcgcgtgcagaaccaccacttgctgctcgttctcaccgccaccgaagcg
cccgactccgacagcggtccggaggcgtttctcgaagacgtcgccaacttgcccctccag
caccttcgtatcggtccgctcgacgaagaggccgtctccgaattggtcgccagtgagctg
ggtggggatggcctacctgttcgcgtcgtgcgccagatcaccgcacgcactcaaggggtt
ccgcttgcggtgcgcgagtacctgttcagcatgctcgaggccggtgtgcttcgccccacg
cgtgacggctggtgggtcgacaccgccgggctcgcctccttggatctgcccgccgacgtc
actctcctgatgctgcgccgcattgaagagttgggcgacgagccacgctcggtgctacgc
gccgccgccatcgaggggcagcacttccatatcggcctttgcagcgagtacagcggcgtc
gacgaaggcggcgtcagcgaggccgttgcccatggaatccagttgcggctcgtcgagcat
gtgaaagaggatatctacgcctttgttcatcgacgcattcgcagtgccttggccgacgag
ctcgacgaatcgtctcgtcgcgccgtccaccagcgaatcgccgaggtgctcgacgactcg
caggccaacggtgacgcccatctcttctcgctggcgcgccactacgccaacggccaggtc
gactcgaatcgccaacgggtctacgagacaaacctccatgctggtttgctcgcccttcgc
aagcacgccttcgaggaagcctacaattttctccttaccgcgcgccttcactcgccgggc
gaagtcgacgcgcagctccttcgcgcgctcggcgaagcttgcgcggcgacagggcgggtc
tcggaggccatccggttattcgaaaacgctgtcgcgctcgcgtccagcgatgtggagcgc
gctcgtctgcacgcgcgcatcgctcgagtctacatggcagtgctcgagatggacgaggct
tgggcgcagatccaactcgccctggaccatgtcgacggcaagatgcccacgaccaccgcg
gcgcgcggcttcgggaccgtgctcgcatggctgatggcttggcttgcggcgaggtttcct
tcgaaggcgagaactcacgacgccgccgccagtgctacaatgcgtcttcgggcccatctg
tacgagatcggcgcgatcaccgcgttctttcgtctcgactacgacctgatgggagggctg
gtcatccgcgcgctgcgcatcgcccgtcggctacccgactgcgccgagaaggcgcaggct
ttttcgacctacggcgccgtactcgccattttgggccggcatgccacggctgaagagtac
gccacacgcgccatcgagatcgccgaggctctcgacgaccgcgaggtactcgctcgcgct
cgatggttcgagtcgaccacgtacgagttctcgggggacgcgcgccgcgccgaaacactg
ctccgccagacgcttcgcgagcacggcttgtggctcgagctctgggagtacgtcaccgtg
tgtggcgaactcggaggccttcttctcgaccgcggtttcgtgcacgaggcaggctcgtgg
gggaagaagattctggagcgcaccgacgacaccgcctgtcacggagagctggtccacatg
gagcgggtctatgggttgtatctggaggcagcagctcgtgcctggggcggaaaaggcatc
gaggcgcacgccttcgtcgaacaagctcgccggttgctagaggggcgagttcaggtcggt
ttgggcgaagccagcgcggtaggctacgagttggccgtccactacgagttgggcaaccgc
ggtaaagatgtcgagaagctcttggcaaaatggaagcgcttcgagctcgtcccagaccgc
tcgccccaccagatccggcgcttctacatctaccaggcttatctgcgcctcgaccagttt
cggtacgcgcgcgagttcgaccaaagagccgctcgcgcacgttttctcgaagcgctcgac
gagttgaagctggccgccgatacccccaaatacgccacgcacctgtatgtcatccagtcc
gactgggaggcgttgaacgggcaagatgagagggcggggtggttgctcagccgggccgac
gaggtcgccgatttggccaacagtccctggggcaacttcgaggtggcgcttcgtcgagcg
agacggctcaagagacaggggaacgagcgtgcagcgctgcgccgggcgcgctacgcccac
tcactggcgtccgagtacggctggagccatcgcgcccgggacgtgcgcaacgaattcgag
ttctatgtcgatccgagctcgtcgacgacgaccacctcgcgctcacgcgggcactcgcat
tcggcctccgagggttcgacggatgcgcagtcgctcaagttggagcgctatctcgattcg
ttgatggaagtggccatcgcttcgggcacggtcttcgacccgcgcgagcaggctcgcgtg
gcgctcgacgagattgtccggatcttcggcgccgagcgtgccttcctttttggcggcgag
cgtatcgacgaactcgacgtcatcgccgggcgcgacgtgcgcgggcgagacctgggcgac
cgcggcgactactcgagcagcgtcgtcgagcgcgtctgccgcgagcggcgctccatcgtg
agcacgggctcggacgagggcgatgtgctctcgagcgcgagcgccgtgcaccacaacctg
cgaagcatcatggcaggacctgtccagattcaagaccgcttcctgggcgtggtctacgtc
gacagtcgtatcgccaggggcgtctttgctcccgacgatgccgagattctcatggcgatc
tcgagtcatatcggcatcgcccaggaaaccgcacgcgccgcccagctcgaggtcgacatc
gagtcggagcgcaagaagcgcgagctcgccgaggtcattcgccacaccactgccgcgatg
acctccacgctcgatcagtccgaggtcttggagcgtctcctcgagggggtcgggcagctc
gttgtcgccgatcgtgccgtggcgtttttgctcgacggcgatcagctcgaactgttcgtc
gagctgggcgatggtggggcgacggtgggcgaagcgtccgaatggatctttggcgatcct
cgcatcgagcgcgtcatggagacggtcgagccgcaggtgtcgtcggatggcgacgacctg
ggaggcacgttcagccacgccgacgagggctactcgtggatgggcgtgccgatcgtatcg
cgtgagcagttggccgggatgatcttactcgagcgcgacgaggacgacgcctacggcccc
gaccatgtccagctcgccctggcactggcagggcaagcaggcatcgccatcgaaaacgcc
cgcctatttgcccaggtcgagcgactcgccatcctcgatgacctcaccgggcttccaaac
cgtcgccgactcttcgaggtcgccgaagccgagttttcccgtgcccgccgctacgccaag
ccgttgtcagcgatcatgctcgacatcgatcacttcaagaaggtcaacgacacttacggc
cacgccatcggtgacgaaatcctgcgcgccgtcgcccaccgctgcgatgacgcgctgcgc
gagacggacaccatcggcaggtacggcggtgaagagttcgtggtgatcatgcccgagacg
tcactcgacgaggcgagccaatgtgtggcggagcggctgcggaccgcggtggcagacgct
tcgatcgtcaccgaccgcggcgaggtgtcggtgacgatcagcctgggcgtcgccgagctg
acgcctgccgatgaggacgtcgactcgttgctcaatcgcgccgacgaagccttgtaccgc
gccaaggaaggcggccggaaccgggtcgaggtggccttgtcatgcacggacacggcgtca
cattcatag
DBGET
integrated database retrieval system
