Persicimonas caeni: FRD00_02510
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Entry
FRD00_02510 CDS
T06769
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03030
DNA replication
pcay03430
Mismatch repair
pcay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRD00_02510 (holA)
03430 Mismatch repair
FRD00_02510 (holA)
03440 Homologous recombination
FRD00_02510 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcay03032
]
FRD00_02510 (holA)
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_02510 (holA)
Enzymes [BR:
pcay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRD00_02510 (holA)
DNA replication proteins [BR:
pcay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRD00_02510 (holA)
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRD00_02510 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
QED30873
LinkDB
All DBs
Position
644699..645760
Genome browser
AA seq
353 aa
AA seq
DB search
MGKKLDSARNFFRKLKKSEPAPVYFVWGEETYMLDEAVDAIIEHAAPGGTNDFNFDSFHG
RNTSGESIVSACEMLPMMVERRLVVVRDAQELPMSELEQLGSYLDDPSPTTCLIVHARTA
QKKLDGRKSIVKKLKKAGVSCEFASLYENEVGEILHKQAGRRDLRLTPAATAYLIEAVGT
DLASLDKAMDKLDLYVGQSDQSPRHVDDDVVREVVADTKVRSVFDLTDALGDRKFEEALK
ILDSMLLNGEPPLRILAMIARHFRIVAKLHDPSVRNESRNNKARAVGVVPYFLKDYQRHA
SKFSPRDIEAIRGRLLEVDTALKSSGLDDRTVMERLLYDICFRANKSSSRAHG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaactcgacagcgcacgtaacttctttcggaagctcaagaagagcgagccc
gcccccgtctattttgtgtggggtgaagaaacctacatgctcgacgaggcggtcgacgcg
atcatcgagcacgccgcccccggcggaaccaacgacttcaacttcgactcgttccacggc
cgcaacaccagcggcgagtcgattgtgtcggcttgtgagatgctgccgatgatggtcgag
cgccggctggtcgtcgttcgcgacgcccaagagctgccgatgtccgagctcgagcagctc
ggctcgtatctggacgacccgtcgcccacgacctgcctgatcgtccacgcgcgcaccgcg
cagaagaagctcgacgggcgcaagtcgatcgtcaaaaagctcaagaaggcaggcgtaagc
tgcgagtttgcgagcctctacgagaacgaagtcggcgagatcctgcacaagcaggccggc
cggcgcgatctgcggctgacgccggcggcgaccgcctacctcatcgaggcggtcggcacc
gacctcgcctcgctcgacaaggcgatggacaagctcgatttgtacgtcggccagtccgac
caatcgccgcgccacgtcgacgacgacgtggtgcgcgaggtcgtcgccgacacgaaggtg
cgctcggtcttcgacctgaccgacgccttgggagatcgcaaattcgaggaggcgctcaag
atcttggacagcatgctgctcaacggtgagccgccgcttcgcatcctggcgatgatcgcc
cggcatttccgcatcgtcgccaagctgcacgacccgtcggtgcgaaacgagagccgcaac
aacaaggcgcgcgccgtgggtgtggtcccctactttttgaaggactaccaacgccacgcg
tcgaagttctccccgcgcgacatcgaagcgattcgcggccggctgctggaggtcgacacc
gcgctcaagtcgagcggactcgatgaccgaacggtcatggagcgactgctgtacgatatc
tgttttcgagccaacaagtcttcgagtcgcgctcacggctga
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