Persicimonas caeni: FRD00_02870
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Entry
FRD00_02870 CDS
T06769
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03420
Nucleotide excision repair
pcay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRD00_02870
03430 Mismatch repair
FRD00_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_02870
Enzymes [BR:
pcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRD00_02870
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRD00_02870
MMR (mismatch excision repair)
Other MMR factors
FRD00_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QED30940
LinkDB
All DBs
Position
766086..768140
Genome browser
AA seq
684 aa
AA seq
DB search
MMNLNLGMLNPQQREATTHIDGPLLILAGAGSGKTRVITTRIAYLITRGIEPKSILAVSF
TNKAATEMQERVAQLTGDKLAQQTYLSTFHSLGADILRQDIDALGFKKPFTILDQGDQQS
VIKDAFKELKLDPKVVDPRRILSLISKAKMGFCEPKELPELKHDPLMPYAQKIYGFYTGA
LKGLNAVDFDDLICLPVVLFKEHEKVRQKYARRFQYVMVDEYQDTNMTQLLFLRELVKDH
MNLCVVGDDDQSIYGFRGAVAENILEFEKQFEGVKVVKLEQNYRSTNNILRAANEVIANN
SVRKEKALWSSKGDGTKLRYVECEDEREEAEFVAAEIERYKLKYDLRYRDCAILYRVNPQ
SRLFEEALRTYRIPYTVVGSTEFFDRKEVKDFVAYLKACVNHNDEVSIRRVVNVPPRGIG
PTLLERISDFAHEEDISFHLALCKIADDPSHVHGIGYAVSENIADFIDILDTFNEKFEEA
EDDPSIRMAEISREVLKRTNLIDHIRSVEKNPKIARRRIDNVDEILSSLSQYQDAGGDSL
KSYLTRITLDRSDPGEDEAEKEGVRMMTLHSSKGLEFPVCFLVGMEEGYLPHGRSLDDRQ
GLAEERRLCYVGITRAKEHLTLTSAAMRKRYGQEEDREPSRFLEEIPEETIEWQRAESSV
SLAEKREEQNQKYLSALKSAIFDD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacctgaacctcggcatgctcaacccgcagcagcgggaggcgaccacccatatc
gacggcccgctgctgattctggccggcgcaggtagtggcaagacgcgcgtgatcaccacg
cgcatcgcctacctgatcacccggggcatcgagcccaagtcgatcttggcggtgagcttc
accaacaaggcggccaccgagatgcaggagcgcgtcgcccaactgacgggcgacaagctc
gcccagcagacgtacctgtcgaccttccacagcctcggcgccgatattttgcgccaggat
atcgacgcgttgggcttcaagaagccgtttacgatcctcgaccagggcgaccagcaatcg
gtgatcaaagacgcgttcaaggaactcaagctcgacccgaaggtcgtcgacccgcgccgg
atcctgagcctgatcagcaaggcaaagatgggcttttgcgagcccaaggagctccccgag
ctcaagcacgacccgctgatgccctacgcccagaagatctacgggttctataccggcgcc
ctcaaagggttgaacgccgtcgacttcgacgacctgatctgcttgccggtcgtcctcttc
aaggagcacgaaaaggtacgccagaaatacgcgcgccgcttccagtacgtcatggtcgac
gagtaccaggacaccaacatgacccagctgctcttcttgcgcgagctggtcaaagaccac
atgaacctgtgcgtggtgggtgacgacgaccagagcatctatggcttccgaggcgcggtc
gccgagaatatcctggagttcgagaagcaattcgaaggggtcaaggtcgtcaagctcgag
cagaactatcgctcgacgaacaatattttgcgcgcggccaacgaggtcatcgcgaacaat
tcggtgcgcaaggagaaggcgctgtggagctcgaagggcgacggcacgaagctgcgctat
gtcgagtgtgaggacgagcgtgaggaggccgagttcgtcgccgccgagatcgagcgctac
aagctcaaatacgacctgcgctaccgcgactgcgcgattctgtaccgcgtcaacccgcag
agccggctcttcgaagaggcgcttcgcacctaccgcatcccgtacacggtggtcggctcg
accgaattcttcgaccgaaaagaggtcaaagacttcgtcgcctacctgaaggcgtgcgtg
aaccacaacgacgaggtgagcatccgccgagtcgtcaacgtgccgccgcgcggcattggc
ccaaccctgctcgagcgcatcagcgacttcgcccacgaagaagacatcagcttccacctg
gccctgtgcaagatcgccgacgatccgtcgcacgtgcacggcatcggatatgcggtctcg
gagaacatcgccgatttcatcgacatcctcgacacgttcaacgagaagttcgaagaggcc
gaggacgacccatcgattcgcatggccgagatcagccgcgaggtcctgaagcgcaccaac
ctcatcgaccacatccgaagcgtcgagaagaaccccaagatcgcccgccggcgcatcgac
aacgtcgacgagatcttgtcgtcgctctcccagtaccaagacgccggaggcgactcgctc
aagagctacctcacccgcatcaccctcgaccgcagcgaccctggcgaggacgaagccgaa
aaagagggcgtgcgcatgatgacgctgcactcgtcaaagggtctcgagttcccggtttgc
tttttggtgggcatggaggagggttacctgccccacggccgcagcctcgacgaccgtcag
ggcttggccgaggagcgccggctctgctacgtcggcatcacccgcgccaaggagcacctg
acgctcacgtcggcggccatgcgcaagcgatacggccaagaggaagaccgcgagccgagt
cgtttcttggaggaaatccccgaggagaccatcgagtggcagcgcgccgagtcgtcggtg
agcctggccgagaagcgtgaggagcagaaccagaagtatctgtcggcgctgaagtcggcg
atcttcgacgactag
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