Persicimonas caeni: FRD00_03935
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Entry
FRD00_03935 CDS
T06769
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcay03009
]
FRD00_03935
Enzymes [BR:
pcay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FRD00_03935
Ribosome biogenesis [BR:
pcay03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FRD00_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF6494
Motif
Other DBs
NCBI-ProteinID:
QED31144
LinkDB
All DBs
Position
1046216..1047064
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AA seq
282 aa
AA seq
DB search
MANEMRVQKFLSKAGVCSRRKGEKLMQAGRVQVNGDVCTELGSKVVPGKDEVRVDGEVVT
LPDQYIYVLLNKPENYITTLDDPKDRPIVTDLLPDNMPRIWPVGRLDWDSSGALLLTNDG
KLTNLLTHPSHDVTKQYAVKVRGLLKNDSPKLQKLRDGIRLDGVMTKPAHIEVVKDNGNN
TWLEFIISEGKNRQIRRMCEAIGAPVMKLRRYAIGPLTLDGVPSGAYRPLLHEEVEKLYA
EVEANMPDRAQPSRSAEKRERQRRKRHGKYDVRTHGPGKKHH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaaatgcgcgttcaaaaattcttatccaaagccggcgtgtgcagccgacgc
aagggcgaaaagctcatgcaggcaggccgtgtgcaggtcaacggcgacgtgtgcaccgag
ctaggctcgaaggtcgtgccgggcaaggacgaggtgcgcgtcgacggcgaagtcgtcacg
ctgcctgaccagtacatttacgtgctgctcaacaagccagagaactacatcaccacgctc
gacgaccccaaagatcgtccgatcgtgaccgacctactgcccgacaatatgccgcgcatc
tggccggtaggccgcctcgactgggattcgtcgggcgcgctgcttttgaccaacgacggc
aagctgaccaacctgctgacccacccgagccacgacgtcaccaagcagtacgccgtcaag
gtgcgcggcctgctcaaaaacgactcgccgaagctgcagaagcttcgcgacggcatccgc
ctcgacggcgtgatgaccaaaccggcccacatcgaggtggtcaaggacaacggcaacaac
acctggctcgagttcatcatcagcgagggtaagaaccgtcagatccgccggatgtgcgag
gcgatcggggcgccggtcatgaagcttcgccgctacgccatcgggccgttgacgctcgac
ggcgtcccctcgggcgcctatcgaccgctgctgcacgaagaggtcgaaaagctgtacgcc
gaggtcgaggccaatatgcccgatcgcgctcagccgagtcgcagcgccgagaagcgcgag
cgccagcgcagaaagcgccacggcaagtacgacgtgcgcacccacggaccgggcaaaaag
caccactga
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