Persicimonas caeni: FRD00_04025
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Entry
FRD00_04025 CDS
T06769
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pcay
Persicimonas caeni
Pathway
pcay02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRD00_04025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcay02022
]
FRD00_04025
02035 Bacterial motility proteins [BR:
pcay02035
]
FRD00_04025
Two-component system [BR:
pcay02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
FRD00_04025
Bacterial motility proteins [BR:
pcay02035
]
Pilus system
Twitching motility proteins
FRD00_04025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
AAA_16
HTH_50
RsgA_GTPase
Mg_chelatase
MCM
AAA_3
TIP49
ParM_N
HTH_30
HTH_28
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QED31157
LinkDB
All DBs
Position
1063165..1064574
Genome browser
AA seq
469 aa
AA seq
DB search
MSDELSDPQVVRPILVVDDEQSMREFLTIMLKKKGHDVTVAKRGEEALNLLDEGQRFSLV
ITDLKMPGIGGLEVLRGVKKIDPACQVVVMTAYATPETAISAIKDGAYDYITKPFKVDEA
RVVVDRALEKFDLLSENLYLKKTIEERESFGDMIGHSKPMQQVFEMISRVANSQTTILIG
GESGTGKELVARAIHQHSQRADKPFLPINCGAIPENLIESELFGHKKGAFTGATTDKKGL
FEAADGGTVFLDEIGELPQNTQVKLLRVLQERTIKPVGGNAEISVDCRVVAATNRDLREE
IAEGRFREDLYYRLNVIPIDLPPLRARGSDVKLLIEHFVDVYASRMGVEIDGIDSEAMRI
LLNYNYPGNVRELQNIVERAVTLTRGSMIGVDVLPPHLQEDSFSRVARDLEVPAEGLDLE
GMVEELERSLISKALERTSGVKKDAAELLGISFRSLRYRLKKYEMSDES
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagctctccgatccacaagtagtccgtcctattctcgtcgtcgacgacgag
cagagcatgcgtgaatttctcacgatcatgctcaagaagaagggacacgacgtcaccgtc
gccaaacgcggcgaagaagccttgaacctgctcgacgaggggcagcgattcagccttgtg
atcacggatctgaagatgcccggtattggaggcctcgaggtgctccgaggtgtcaaaaag
atcgacccggcatgtcaggtcgtggtcatgaccgcgtatgccacgcccgagacggcgatt
tctgcgatcaaagatggcgcctacgactacatcaccaagcccttcaaagtcgacgaagcc
cgggtggtcgtcgatcgcgctctcgagaaattcgacctgctgagcgaaaacctctacctc
aaaaagacgattgaggaacgagagagttttggcgacatgatcggccactccaagccgatg
cagcaggtcttcgagatgatttcgcgggtggccaatagtcagacgaccatccttattggt
ggagagtccggcacaggaaaggagttggtggcgcgggccatccatcagcatagccagcgc
gccgacaaaccctttttgccgatcaactgcggtgccatccccgagaatctcatcgagagc
gaactcttcggccacaaaaagggagcctttacgggagcgaccaccgacaaaaagggacta
ttcgaggcggccgacggcggcactgtgtttctcgacgaaatcggggagcttccccaaaac
acccaggtcaagcttttgcgtgtgctccaagagcgcaccatcaagcctgtgggcggcaac
gccgagatctcggtcgactgccgtgtggtcgcggccacgaaccgcgatttgcgcgaggaa
atcgccgaaggtcgctttcgtgaagacctgtactaccgcctcaatgtcatccccatcgat
ctccctccgcttcgcgcccgcggctcggacgtcaagctgctcatcgaacatttcgtcgac
gtgtacgcctcgcgcatgggagtggagatcgacgggatcgactccgaggcgatgcgtatc
ctgttgaattacaactatccaggcaacgtgcgcgagctccagaatattgtcgagcgcgct
gtcacgctgacccgagggtcgatgattggggtggatgtgctccccccacaccttcaggag
gactccttctcgcgtgtcgcccgtgacctggaggtgcctgccgaaggtctcgatctcgaa
ggcatggtcgaagaactcgagcgctcgctcatctccaaggccctcgagcgcacctcgggg
gtcaagaaggacgccgccgaacttctcggcatctcctttcgcagcctgcgctatcgtctc
aagaagtacgagatgagcgacgaatcctaa
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