Persicimonas caeni: FRD00_04300
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Entry
FRD00_04300 CDS
T06769
Name
(GenBank) crotonase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pcay
Persicimonas caeni
Pathway
pcay00071
Fatty acid degradation
pcay00362
Benzoate degradation
pcay00650
Butanoate metabolism
pcay01100
Metabolic pathways
pcay01120
Microbial metabolism in diverse environments
pcay01200
Carbon metabolism
pcay01212
Fatty acid metabolism
Module
pcay_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FRD00_04300
09103 Lipid metabolism
00071 Fatty acid degradation
FRD00_04300
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FRD00_04300
Enzymes [BR:
pcay01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FRD00_04300
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_2
ECH_1
NAD_binding_2
DAO
ApbA
Pyr_redox_2
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QED31209
LinkDB
All DBs
Position
1146300..1148678
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AA seq
792 aa
AA seq
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MATKRIRKAVVIGAGVMGRGIAAHLANARIPVHLLDIVPQPQEGDDPKDPAFRSKIARNA
IQQIKKSKPALIFTKRDLELITPGNIEDDLDVLADADWVVEAVPERMDIKQATFSKIEEH
AGEDTIITSNTSGLSIAGMLEGRSDSFKERFLVTHFFNPVRYMKLLELVEAEDTSSEVTE
TMIAFGRDVLGKGIVFGKDTTNFIANRIGVHGIMSIMHLMSDFDMTIEDVDQVFGKPMGR
PKSAVFRTGDVVGLDTFVHVADNCHETLTDDEDREVFEVPDFLRDMVEKGWTGQKAGQGF
YKKTDEGIMALRPESMEYEKRDKSDFSSLSGAKGSPADKIRYVIREGEDKAADFARAATY
RSLAYTARRMGEIADDVVNIDRAMRWGFNWKLGPFQTWDAIGLEWSVEQMKEEGIELPSW
IDEMVEAGHESFYRWNGATREYYDVEANDYKPVPADEREISIDVLKKSDKKVMGNSSASL
YDMGDGVALLEFHTKMNSVDNDIIAMMEQAADEVEDGDWRGLVIGNGSDNFSAGANLMLV
LMNARAGNWDDIEEMVTRFQAANQRMRYLSKPVVAAPRGLTLGGGAEVAMGANAIQPAGE
LYMGLVEVGVGLVPGGGGNLQLMRNIFGKHASDADFDALPFLQKVFMQIGMAEVSRSAEQ
AREAGFLKLDDGLSINAEHRLHHAKQRVIGMYEAGFRAPRPTQFRLPGKDGVATIDMMLY
SMEGQKQISAYDRHIGKMLANVLCGGETTRAVLTSEDRLLELEREAFLSLCGEEKSQERM
QHMLMHNKPLRN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaagcgcattcgaaaggccgtcgtcatcggcgccggggtcatgggtcgcggc
atcgccgcgcacctggccaacgctcgcatccccgttcacctgctcgatatcgtcccacaa
ccccaggagggcgacgatccgaaggatccggcgtttcgcagcaagatcgcgcgcaacgcg
atccagcagatcaagaagagcaagccggcgctcatcttcaccaagcgcgatctcgagctg
atcacgccgggcaacatcgaagatgatctcgacgtgctcgccgacgccgattgggtcgtc
gaggccgtgcccgagcgtatggacatcaagcaggcgaccttctccaagatcgaagagcac
gccggcgaagacaccatcatcacctcgaacacctccgggctgtccatcgcgggcatgctc
gaaggccgcagcgacagcttcaaagagcgcttcctggtgacgcacttcttcaacccggtg
cgctacatgaagcttctcgagctggtcgaggccgaggacacctcctcggaggtcaccgag
acgatgatcgcgttcggtcgcgacgtgctcggcaagggcatcgtgttcggcaaggacacc
accaacttcatcgccaaccgcattggcgtgcatggcatcatgagcatcatgcacctgatg
agcgacttcgatatgaccatcgaagacgtcgatcaggtcttcggcaagcctatgggccga
ccgaagtcggctgtgttccgcaccggtgacgtcgtcggtttggacaccttcgtgcacgtg
gccgacaactgccacgagacgttgactgacgacgaggaccgcgaggtctttgaagtcccc
gacttcctgcgcgacatggtcgaaaagggctggacgggtcaaaaggccggccagggcttc
tacaagaagaccgacgaaggcatcatggcccttcgcccggagtccatggagtacgaaaag
cgcgacaagagcgacttttcgagcctatcgggtgccaagggctcgccggcggacaagatc
cgctacgtcatccgcgagggcgaggacaaggccgccgatttcgcacgcgccgccacctac
cgctcgctggcctacacggcgcgacgcatgggtgagatcgccgacgatgtcgtcaacatc
gatcgcgcgatgcgctggggcttcaactggaagctcgggccgttccagacctgggacgcc
atcggcctcgagtggtccgtcgagcagatgaaggaagaaggcatcgagctgccctcttgg
atcgacgagatggtcgaagccggccacgagtctttctaccgctggaacggagccacgcgt
gagtactacgacgtggaggcaaatgactacaagccggtgccggccgacgagcgcgagatc
tccatcgacgtgctcaagaagtcggacaagaaggtgatgggcaactccagcgccagcctc
tacgacatgggcgacggcgtggccctgctcgagttccacaccaagatgaactcggtcgac
aacgacatcatcgcgatgatggagcaggccgccgacgaggtcgaagacggcgactggcga
gggctggtcatcggaaacggctcggacaacttctcggcaggcgccaacctgatgcttgtg
ctcatgaacgcacgcgcgggcaactgggacgacatcgaagagatggtcacccgcttccag
gccgccaaccagcgcatgcgctacctgtccaagccggtcgtggctgccccgcgcggcctg
acccttggtggcggcgccgaggtagccatgggcgccaacgctatccagcctgccggcgag
ctctacatggggctggtcgaagtcggcgtgggcctcgtgcccggcggtggcggcaacctg
cagctgatgcgcaacatcttcggcaagcacgccagcgacgccgacttcgacgccctcccc
ttcctgcagaaggtcttcatgcagatcggtatggccgaagtctcgcgcagcgccgaacag
gcacgcgaggcgggcttcctcaagctcgacgacgggctgtcgatcaacgccgagcatcgc
ctgcaccacgccaagcagcgggtcatcggcatgtacgaagcgggcttccgtgcgccgcgt
cccacccagttccgcctgcccggcaaggacggcgtggcgaccatcgacatgatgctctac
agcatggagggccagaagcagatctcggcctacgaccgccacatcggcaagatgttggcc
aacgtgctgtgcggcggcgagaccacccgcgcggtgctcaccagcgaagaccggctgctc
gaactcgagcgcgaggccttcctgtcgctgtgcggcgaagagaagagccaggagcgcatg
cagcacatgctcatgcacaacaagccgcttcgtaactaa
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