Persicimonas caeni: FRD00_05355
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Entry
FRD00_05355 CDS
T06769
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcay03021
]
FRD00_05355
Transcription machinery [BR:
pcay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRD00_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
RNA_pol_Rpb2_5
HTH_59
Motif
Other DBs
NCBI-ProteinID:
QED31397
LinkDB
All DBs
Position
1453942..1454940
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AA seq
332 aa
AA seq
DB search
MSRATESSTNSDPTYLQAMPEHEGVADDGDCRAALLEAKKLWSSVSLTAETDPLTAYLNR
LNHLEPLPSDAQQELAVRYIEEEDIEAAKLLILTNLRLVVKLAKEYQRRRTNLLDLIQQG
NVGLSEALTRYDPYRGVKFTSYAQYWIRAMILNYLMNQTHPVRIGGSRAGRKLFYNLKKA
RRALIQGGQKPTAASVAEYLDVKEEEVVRIAAQLDAPPVYLDAQAPGHEDTTVGELMESD
SVNPETAAAEYDIQSQIRRCIDQFGEGIDDERRQSIWFDRMIADEAKTLAELGDDWGVSK
ERIRQIEVGMREDFRKFLMENLGDDVQLEWLQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgagcaacagaatcgtcgaccaattccgatccgacgtatcttcaagccatgccc
gagcacgagggggtcgccgacgacggcgactgccgggcagcgctactcgaggccaaaaag
ttgtggtcctcggtcagcctgacggccgagaccgatccgctgacggcctacctgaaccgg
ctgaaccatctcgagccgcttccttccgacgcccagcaagagctggccgtgcggtatatt
gaagaggaggacatcgaggcggccaagctgctcatcctgaccaacctgcgcctggtcgtg
aagctcgccaaggagtaccagcgccgacgcaccaaccttctcgacctgatccaacagggc
aacgtgggcttgagtgaagccctgacgcgctacgatccctatcggggcgtcaaatttacg
agctacgcccagtattggatccgggcgatgatcctgaattacttgatgaaccagacccat
ccggtgcgcatcgggggatcgcgcgccgggcgaaagctgttctacaacctcaaaaaggcg
cgccgcgcgctgatccaagggggccaaaagcccaccgccgcctccgtggccgagtacctc
gacgtcaaagaggaggaggtcgtgcgcatcgccgcgcagctcgacgcgccgccggtttac
ctggacgcccaggcgccgggccacgaagacaccaccgtaggcgagttgatggagtccgat
tcggtcaatccggaaacggccgccgccgagtacgacattcaaagccagattcgccgctgc
atcgaccagttcggcgaaggcatcgacgacgagcgacgccagtcgatctggttcgaccgc
atgatcgccgacgaggcgaagaccttggccgagctgggcgatgactggggagtctccaag
gagcgcatccgccagatcgaggtgggcatgcgcgaggatttccgcaagttcctgatggag
aatctgggcgacgatgtgcagctggagtggttgcagtag
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