KEGG   Persicimonas caeni: FRD00_05500
Entry
FRD00_05500       CDS       T06769                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pcay  Persicimonas caeni
Pathway
pcay02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FRD00_05500 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcay02044]
    FRD00_05500 (trbB)
Enzymes [BR:pcay01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     FRD00_05500 (trbB)
Secretion system [BR:pcay02044]
 Type IV secretion system
  Trb secretion system protein
   FRD00_05500 (trbB)
SSDB
Motif
Pfam: T2SSE ABC_tran nSTAND3 AAA_29 AAA_19 AAA_23 ResIII TrwB_AAD_bind AAA_16 DEAD Zeta_toxin AAA_30 FtsK_SpoIIIE Sigma54_activat Mg_chelatase AAA_7 SMC_N IstB_IS21 AAA_5 AAA_22 NB-ARC DUF87 NACHT GTP_EFTU TsaE AAA_28 PIF1 CbiA ORC-CDC6-like DUF6079_1st ATPase UvrD-helicase MMR_HSR1 P-loop_TraG MobB PduV-EutP AAA_11 DUF7973 RsgA_GTPase AAA_10 Parvo_NS1 ATP_bind_1 AAA Sigma54_activ_2 Dynamin_N AAA_2
Other DBs
NCBI-ProteinID: QED31424
LinkDB
Position
complement(1486448..1487386)
AA seq 312 aa
MSEKQDRLMNMLEHSCGPELWQLLNDELITEVMANPDGRVWVEKFSVGMVDSGVRVRSAE
VESIINIVASSADEVCNRQKPSLAAVLPESGARFQGFVPPVVPAPMFVIRQRATRVFSLQ
DYVDDGYMSYEQAKAIYEAVVDRQNVLIVGGTGSGKTTLANAILQVISGTEDRVLTIEDT
PELQCTAPNHIAFYIDRDSGFTWQKAVKDSLRSRPDRIVVGEVRDASALDLLKAWNTGHN
GGCATIHANSALRGLTRLESLIEEAIPRAPVQLIAEAVNLVVYIEGTATGREVKTVARVM
CHDGQEYQLQEV
NT seq 939 nt   +upstreamnt  +downstreamnt
atgtcggaaaaacaagaccgcctcatgaacatgctcgagcacagttgcggacccgagctg
tggcaactgctcaacgacgagctcatcaccgaggttatggcgaatccagacggcagggtc
tgggtcgagaagtttagcgtcggcatggttgactcgggcgttcgcgtccgctctgcggaa
gtcgaatccatcatcaacatcgtcgcatcgtcggccgacgaggtgtgcaaccgacaaaag
ccctcccttgctgctgtgctccccgaatccggcgcgcgcttccaggggtttgtgcctccc
gtggtgccggcacccatgtttgtcatccgccagcgcgcaacccgcgtgttcagcctgcag
gactacgtagacgacggctacatgtcttacgagcaggccaaggccatctatgaagcggtg
gtcgaccgtcagaacgtcctcatcgttgggggcaccggctcgggaaagacgacgctggcg
aacgctattctgcaggtcatttcggggaccgaagaccgcgtgctcaccattgaggatacg
ccggaacttcagtgcaccgcgcccaatcacatcgcgttttacatcgaccgggacagcggc
tttacctggcaaaaggcggtcaaagacagtcttcgtagcaggccggatcggatcgtcgtc
ggtgaggtgcgcgacgcgtcggctctcgatctcttgaaggcatggaacaccggacacaat
gggggctgtgccaccatccacgccaacagcgcgttgagggggctcactcggctcgagagt
ctcatcgaggaagctatccccagggctcctgtgcaactgatcgccgaggcagtcaacctc
gttgtctacatcgagggcaccgctaccggccgggaggtgaagaccgtcgcccgcgtcatg
tgccatgacggtcaagagtatcagcttcaggaggtgtga

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