Persicimonas caeni: FRD00_06085
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Entry
FRD00_06085 CDS
T06769
Name
(GenBank) DEAD/DEAH box helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcay03021
]
FRD00_06085
Transcription machinery [BR:
pcay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FRD00_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
RapA_C
FhbB
ResIII
Motif
Other DBs
NCBI-ProteinID:
QED31538
LinkDB
All DBs
Position
complement(1646736..1649888)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTVIPAGALIRNREVPELGSGRVIAELEGGAAKVVFENSDEVREVRLQHADIVRQPLMPG
TLVKVQRGDKVLEGEITDVDWPDSPRELCVYMVDIDGDEDTIFESQITPREPASSDPRDH
FGALHWRGPFRFFSRWDMHRTISRWYEDSEGLPTMIGARIVPQLHEVHAVRNVLWDTKRR
YLLADEDAQARLYEAGMVIQRMYASDPHLRVLVIAPGRRTHRWQTDLEQRFGNRSFVRVD
ASHLEANPQERWAAVSHNQRLIVSMGCLQQFPQACSELILGAGWDMVVFDDVHRLRHNDP
AYDCLSAVSLESEHVLMLGALPETPDAASLAPMLALLRPGVYDATDTAAVQARLDGLDGD
HLERRVVRSSRERLEQYDVTWNEREHEVLRYEPDESERAIAEHLQALPPESLGNPLQLAL
RGLYYAAAAGAPDRLFAMLDERLESIETTAGNAHQELLPFDLLGIDAGPREEEMLWDMIV
AGASEMDGEGEWIAEAMSLVGQWHAESEMACARFEAAAGWIEAFLAEENEAEDDEEDDGE
PPRKVLVACTSEQSAQDLSFFLESRFEMDAVEVVHARQPAPEQNDAVERFRRDATCRVLV
CDETGAAGRDLSNASVIVHVEQPWSATRVERRISWVDQIHRNRETPVRSVVLVGPTGVEQ
ALHELYDEVLGVYAATSYDREYTVADIDRDIWMAACAGQEAVGGLVARTKEKLDSLAEVD
TTAYQAALDASDERLEADAEFADLLDFVDGVADSLPIRHWARMLGIQDHSAGPGIYDFKW
HWKNVRRGLTGFDTSPEDVDFLMPQEQVEMMSGTFSRKRALRSENLEFFAPGHRFIDALI
EDALAPTDGRTTVFARRLGPQNRGKAYLNVVALAQLDPEAWGAHDMPPGLINRAYRHLWP
ESISVPVEIDLKGRRDPRIVEDWDLIQKIEESYQGPEADQKIEYEIFIQAIEDIARFRKL
LNEAVELALEKLKEDRAGLVDGAAAELGDDLAAEMEVLKAEAASDDEQRANEAAYELELL
EKLIDSVRHEKLELDALAIVVAGTPQILMR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaatccccgccggcgcgcttattcgtaaccgtgaagtccctgaactcggctct
ggccgcgtgatcgcggaactcgagggaggggccgccaaggttgtcttcgaaaactccgat
gaagtgcgcgaggtacgcctgcagcacgccgatatcgtgcgccagccgctgatgccgggt
acgctggtcaaggtccaacgcggcgacaaagtgctcgaaggcgagatcaccgacgtcgac
tggcccgactcgccgcgcgagttgtgcgtctatatggtcgacatcgacggtgacgaagac
accatcttcgagtcgcagattaccccccgcgagcccgcctcgagcgatccgcgcgaccat
ttcggcgcgctgcactggcgcgggcccttccgattcttctcgcgctgggacatgcaccgc
acgatctcgcgctggtacgaggactcggagggacttccgacgatgatcggcgcgcgcatc
gtgccgcagttgcacgaagtgcacgcggtgcgaaacgtgctgtgggataccaagcggcgc
tacctgctcgcagacgaggatgctcaggctcgcctgtacgaggcggggatggtcatccag
cgcatgtatgcctccgatccgcacctgcgcgtgctggtcatcgccccggggcggcgcacc
catcgctggcagaccgacctggagcagcggttcggaaaccgctcgttcgtgcgtgtcgac
gccagccacctggaggccaatccccaggagcgctgggccgcggtgagccacaaccagcgt
ctaatcgtctcgatgggttgtctgcagcagtttccccaggcgtgctccgagctgatcttg
ggggcgggatgggacatggtggtcttcgatgacgtgcaccgccttcgccacaatgacccg
gcctatgactgtctgtcggccgtgtcgctggagagtgagcacgttttgatgctcggcgcg
cttcccgagacgcccgatgctgccagcctggcgccgatgctggcgctgcttcgtccgggc
gtctacgacgcgaccgatacagcggcggtccaagcccggctcgacggactcgacggcgac
cacttggagcgccgcgtggtccgaagcagccgcgagcgactcgagcagtacgatgtcacg
tggaacgagcgcgagcacgaggtgcttcgctacgagcccgacgagagcgagcgcgccatc
gccgaacatctgcaagcgctgccaccggagagcctgggcaatcccttgcagctcgccctc
cgggggctctactacgccgcggcggcaggcgctcccgaccggctcttcgcgatgctcgac
gagcgcctcgaatccatcgagacgacggcgggcaacgcccaccaggaactgcttcccttc
gacctactcggcatcgacgccgggccgcgcgaagaagagatgctgtgggatatgatcgtg
gccggcgccagcgaaatggacggcgaaggcgagtggatcgccgaggcgatgagcctggtt
ggccagtggcacgccgaatccgagatggcctgcgcgcgcttcgaggccgcagccgggtgg
atcgaggcgtttttggccgaggagaacgaagccgaagacgatgaggaggacgacggcgag
ccgccgcgcaaggtcttggtggcctgcacctccgagcaatcggcccaggacctgtcgttc
tttttggagagccgcttcgaaatggacgctgtcgaggtggttcacgcacgccagcctgcg
cccgagcaaaacgacgccgtcgagcggttccgccgcgatgcgacgtgtcgtgtgctggtg
tgtgacgagactggcgcggctgggcgcgacctgtcgaacgcttcggtcatcgtgcacgtc
gagcagccgtggtcggccacccgcgtcgagcgacgcatctcgtgggtcgaccagatccac
cgcaatcgcgagaccccggtgcgctcggtggtgctcgtcgggcccaccggcgtcgagcaa
gctctgcacgagctatatgacgaggtgctcggggtgtacgcggcgacgtcgtacgaccga
gagtacaccgttgccgacatcgaccgtgacatttggatggcggcctgcgccggccaagag
gccgtcggcgggctagtcgcacggactaaagagaaactcgactccctcgccgaggtcgac
acgaccgcttatcaggcggcgctggacgcctccgatgagcgtttggaggccgacgccgag
ttcgccgacttgctcgattttgtcgacggggtcgccgactcgctgcccatccgccactgg
gcgcgcatgctcggcatccaagatcattcggcggggccgggtatctacgatttcaagtgg
cactggaagaacgtgcgtcgcggccttaccggcttcgacaccagccccgaggatgtcgac
tttttgatgcctcaagagcaagtcgagatgatgtcgggcacgttcagtcgcaagcgggcg
cttcgaagtgaaaacctcgagttcttcgccccgggccaccggtttatcgacgcgcttatc
gaagacgcgctcgcccctaccgatggtcgcaccaccgtgttcgcgcgccgtctgggtccc
cagaaccgaggcaaagcctatctcaacgtagtcgcgctcgctcagctcgaccctgaagcc
tggggagcgcacgacatgccgccgggactcatcaaccgcgcctatcggcatttgtggccc
gagtcgatctcggtacccgtcgagatcgacctcaaaggccgcagagacccgcgcatcgtc
gaagattgggatctgatccagaagatcgaggagagctaccaaggccccgaggccgaccag
aagatcgaatacgagatcttcatccaggccatcgaagacatcgcccgcttccgaaagctt
ctcaacgaagccgtcgagctggccttggagaagttgaaggaagaccgcgccgggctggtc
gatggagcggccgccgagttgggcgacgacctcgccgccgagatggaggtcttgaaggcc
gaggcggccagcgacgacgagcagcgcgcgaacgaagctgcctacgagctcgagctgctc
gaaaagctcatcgacagcgtgcgccacgagaagctcgagctcgacgctcttgctatcgtc
gtggcgggcacgccccagattttgatgagataa
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