KEGG   Persicimonas caeni: FRD00_08605
Entry
FRD00_08605       CDS       T06769                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pcay  Persicimonas caeni
Pathway
pcay00010  Glycolysis / Gluconeogenesis
pcay00020  Citrate cycle (TCA cycle)
pcay00260  Glycine, serine and threonine metabolism
pcay00280  Valine, leucine and isoleucine degradation
pcay00310  Lysine degradation
pcay00380  Tryptophan metabolism
pcay00620  Pyruvate metabolism
pcay00630  Glyoxylate and dicarboxylate metabolism
pcay00640  Propanoate metabolism
pcay00670  One carbon pool by folate
pcay00785  Lipoic acid metabolism
pcay01100  Metabolic pathways
pcay01110  Biosynthesis of secondary metabolites
pcay01120  Microbial metabolism in diverse environments
pcay01200  Carbon metabolism
pcay01210  2-Oxocarboxylic acid metabolism
pcay01240  Biosynthesis of cofactors
Module
pcay_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcay_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcay_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pcay_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FRD00_08605 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FRD00_08605 (lpdA)
   00620 Pyruvate metabolism
    FRD00_08605 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FRD00_08605 (lpdA)
   00640 Propanoate metabolism
    FRD00_08605 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FRD00_08605 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FRD00_08605 (lpdA)
   00310 Lysine degradation
    FRD00_08605 (lpdA)
   00380 Tryptophan metabolism
    FRD00_08605 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FRD00_08605 (lpdA)
   00670 One carbon pool by folate
    FRD00_08605 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcay04147]
    FRD00_08605 (lpdA)
Enzymes [BR:pcay01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FRD00_08605 (lpdA)
Exosome [BR:pcay04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FRD00_08605 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored FAD_binding_2 Pyr_redox_3 NAD_binding_8 HI0933_like GIDA AlaDh_PNT_C FAD_binding_3 DAO Thi4 Lys_Orn_oxgnase UDPG_MGDP_dh_N Lycopene_cycl DUF6101 3HCDH_N
Other DBs
NCBI-ProteinID: QED32009
LinkDB
Position
2312330..2313733
AA seq 467 aa
MYDLVVIGSGPGGYIAAIRAAQLGMNVACVEKYDSYGGTCLNVGCIPSKALLDSSERFAE
VNHALADHGINVGEVELDLDKMQARRRKVVEDSANGVNFLFGKNKIDGIHGFATIKDKNT
VEVDLNDGDTKTLETKKILIATGSKPSQLPGIEFDDEHILDSTWALELDEVPEHLIVIGA
GVIGLEMGSIWSRLGAKVTVIEYLPQILGGRADKEVMKKGKRIFEKQGLEFVMNAMVTGA
EVKDGQVEVSYQPRDDEEKTETLTGDKLLVAVGRSPYTEGLGLENIGLETDDRGFIHVDG
NYETSVEGVYAIGDVIPGPMLAHLAEHEGVVAVERMNGMGSHVLYEAVPDVVYTHPEIAS
VGKTAAQLDEEGVEYKTGKFMFRANGRARAINDTDGFVKVLADAKTDRILGAHILGPQAG
DLIAELAVAMEFWGSSEDVARSSHAHPSLAEVVKEACLAVEGRALNS
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgtacgatctagtagtcattggttcgggccccggcggctatatcgccgccattcgtgct
gctcaactcggcatgaacgtggcctgcgtggagaagtacgacagctacggcggcacctgc
ctcaacgtcgggtgcatcccgtcgaaggcgctgctcgactcgagcgaaaggttcgccgag
gtcaaccacgcgcttgccgaccacggcatcaacgtgggcgaggtcgagctcgacctcgac
aagatgcaggcgcgccgccgcaaggtcgtcgaggactcggccaacggcgtcaacttcctg
ttcggcaagaacaagatcgacggcatccacgggttcgcgaccatcaaggacaagaatacc
gtcgaggtcgatctcaacgacggcgacaccaagacgctcgagaccaagaagatcttgatc
gccaccggctcgaagccctcgcagcttcccggcatcgagttcgacgacgagcatatcctc
gattcgacctgggccctcgagctcgacgaagtccccgagcacctcattgtgatcggtgcc
ggcgtcatcggactcgagatgggctccatctggtcgcgcctgggcgccaaagtcaccgtc
atcgagtacctcccccagattctgggcggtcgtgccgacaaagaggtgatgaagaaaggc
aagcgcatcttcgaaaagcagggcctcgagttcgtcatgaacgcgatggtcaccggcgcc
gaggtcaaagacggccaggtcgaggtgagctaccagccgcgcgacgacgaagagaagacc
gagacgctcaccggcgacaagcttctggtcgccgtgggtcgctcgccgtacaccgaaggt
ctgggcctggagaatatcgggctggagaccgacgatcgcggcttcatccacgtcgacggc
aactacgagacgagcgtcgagggcgtctacgccatcggcgacgtcatccccggccccatg
ctcgcccacctggccgagcacgagggcgtggtcgccgtcgagcgcatgaacggcatgggc
tcgcacgtgctctacgaagcggtgcccgacgtggtctacacccaccccgagatcgccagc
gtcggcaagaccgccgcacagctcgacgaagagggcgtggagtacaagaccggcaagttc
atgttccgcgccaacggtcgcgcccgcgccatcaacgacaccgacgggttcgtcaaagtc
ctggccgacgccaagaccgaccgcatcctcggcgcccatatcctgggcccgcaggccggc
gacctgatcgccgaattggccgtcgcgatggaattctggggaagctcggaagacgtcgcg
cgcagctcgcacgcacacccgagcttggccgaggtggtcaaagaggcttgtttggccgtc
gagggtcgggcgctcaactcttaa

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