Persicimonas caeni: FRD00_10255
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Entry
FRD00_10255 CDS
T06769
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03420
Nucleotide excision repair
pcay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRD00_10255
03430 Mismatch repair
FRD00_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_10255
Enzymes [BR:
pcay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRD00_10255
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRD00_10255
MMR (mismatch excision repair)
Other MMR factors
FRD00_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
FAM192A_Fyv6_N
Motif
Other DBs
NCBI-ProteinID:
QED32325
LinkDB
All DBs
Position
complement(2790670..2793231)
Genome browser
AA seq
853 aa
AA seq
DB search
MNLLEHLNPPQKQAVEHKDGPLLILAGAGSGKTRVITYRIGWLILEAGVYPEQILAVTFT
NKAAGEMRERVDDILSAHGAGDDAEAVTISTFHSFCARLLRRHADRLGLDWNFNIYDGDD
QLKLVKQVMELEGRPKDRSESRRLRGYINRMKNQGYTPELAHENAFNAVDEEDATFYETY
QEKLREANCADFGDLILGVLEIFRDDPRLADSYSRHWRYLMVDEFQDTNPAQYELLKHLT
RCHDNLAVVGDDDQAIYRWRGATVANILGFEKDYEDAQVIKLEQNYRSTSVILEAANDVI
KHNPTRRDKKLWTEREGGDKISLFTGGDDREEATFVARRIHEMAKAGADWGDFAVFYRTN
AQSRQFEEQLQNWGVPYQVVGGISFYERSEIKDVLAYLKVALNPDNEVDFLRIINTPSRR
IGKVTIEKLQRAARVPGIGTLYRAVRYAAGHLEPSAVGDAPIEPEPFDVADEEALADVDS
LRGRTNSGVEDLCELLFSLRDQIAADEGLAHVSEFLLDQINYHSYLESDDAERVDDRWRN
VRELLGAMEEFEQDFEAREFGPTEDADAPEGTDMVAESRLAKLLGAFLDRSALVHSTDQM
DEKGAVTLMTVHGAKGLEFDTVFLAGMEDEIFPSVRDQFDAEEIHEERRLAYVAITRARH
KLYICNARRRRIYGKTRNTDPSRFLLDIDPERIEIDPQSTSKRIRYSSRRTSNRGGYDAF
RQATEQAYFGSGVDQDAWEFDQSPPMYKNQVSKAVKKTLAEAEDGDFDTSFSQVNPWDDE
FAQEDAWSSEPDAPPAGASPGKDGLTGCTISHSRFGIGEVVNVSGSGDKAVLTINFPGKG
EKTIIRKFVKVLG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcctggaacacctcaacccgccccaaaaacaggcggtcgagcacaaagacggc
ccgctgctgatcctcgccggcgcgggcagcggcaagacacgcgtgatcacctaccgtatc
ggatggctgatcttggaggcaggagtctaccccgagcagatcttggcggtgaccttcacc
aacaaggccgccggcgagatgcgcgagcgcgtcgacgatatcctgagcgcacacggcgcc
ggcgacgacgccgaggcggtgaccatctcgacgttccactcgttttgcgcccgcttgctg
cgccggcacgccgacaggctcgggctcgactggaacttcaacatctacgacggcgacgac
cagctcaagttggtcaagcaggtcatggagctcgaggggcgccccaaagaccgcagcgag
tccaggaggctgcgcgggtatatcaaccggatgaagaaccagggctacacgcccgagttg
gcccacgagaacgcgttcaacgcagtggacgaggaggacgcgaccttctacgagacctat
caggagaagcttcgcgaggcgaattgtgccgacttcggcgacctgatcttgggcgtgctc
gagatctttcgcgacgacccgcgcctggccgacagctacagccgccactggcgctacctg
atggtcgacgagttccaggacaccaacccggcccaatacgagcttttgaagcacttgacg
cgctgccacgacaacctggcagtcgtcggtgacgacgaccaggccatctaccgctggcga
ggggcgacggtggccaatattctggggttcgagaaggattacgaagacgcccaggtcatc
aagctcgagcagaactaccgctcgacgagcgtgatcttggaggcggccaacgacgtcatc
aagcacaacccgacccggcgcgacaagaagctgtggaccgagcgcgagggcggcgacaag
atctcgctctttaccggcggcgacgaccgggaggaggcgacttttgtggcccggcgcatc
cacgagatggccaaggccggcgccgactggggtgacttcgccgtcttctaccgcaccaac
gcccagagccgtcagttcgaggagcagctgcaaaactggggcgtgccgtatcaggtcgtg
ggcggcatcagcttctacgagcgctccgagatcaaggacgtgctcgcctacctgaaggtc
gcgctgaacccggacaacgaggtcgacttcctgcgcatcatcaacacgccgtcgcggcgc
atcggcaaggtgaccatcgagaagctgcagcgcgccgcgcgcgtacccggcatcggcacg
ctgtaccgggcggtgcgctacgccgccggccacctcgagccgtcggcggtgggcgacgct
cctatcgagcccgagccgttcgacgtcgccgacgaggaggccttggccgacgtcgacagc
ctgcgcgggcggacgaattcgggcgtcgaagatctgtgtgagctcctgttctcgcttcgc
gaccagatcgccgccgacgaaggactggcccacgtcagcgagtttttgctcgatcagatc
aattaccactcgtacctcgagagcgacgacgccgagcgcgtcgacgatcgatggaggaac
gtgcgcgagctgctcggcgcgatggaagagttcgagcaagacttcgaggcgcgtgagttc
gggcccaccgaagacgctgacgcgcccgaggggaccgacatggtcgccgagtcgcgtttg
gccaagctgctgggcgcgtttctcgaccgctcggcgctcgtacacagcaccgaccagatg
gacgagaagggcgcggtgaccctgatgaccgtccacggcgccaagggcttggaattcgac
acggtctttttggcgggcatggaagacgagatcttcccgagcgtgcgcgaccagttcgac
gccgaggagatccacgaggagcgccgcctggcctacgtcgccatcacgcgtgcgcgtcac
aagctctacatctgcaatgcgcgccgccggcgtatctacggcaagacgcgcaacaccgac
ccgagccgctttctgctcgacatcgaccccgagcgcatcgagatcgacccgcagagcacg
tcgaaacgcattcgttacagctcacggcgaacctcgaatcgaggcggctacgacgccttc
cgccaggccaccgagcaagcctacttcggcagcggcgtcgaccaagacgcctgggagttc
gaccaatccccgccgatgtataagaatcaagtctccaaagcggtcaaaaagacgctcgcg
gaggccgaagatggcgacttcgacacctcgttctcccaggtgaatccttgggacgacgag
ttcgctcaggaggacgcctggtcgagcgaacccgacgctcctcccgctggcgcctccccg
ggcaaagacggcctgaccggctgcaccatctcgcactcacgcttcggcatcggcgaggtc
gtaaacgtgtctggcagcggcgacaaagcggtgctcacgatcaacttccccggcaagggc
gagaagacgatcatccgcaaattcgtgaaggttttagggtag
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