Persicimonas caeni: FRD00_11560
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Entry
FRD00_11560 CDS
T06769
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pcay
Persicimonas caeni
Pathway
pcay02020
Two-component system
pcay02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRD00_11560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FRD00_11560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcay03021
]
FRD00_11560
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcay02035
]
FRD00_11560
Transcription machinery [BR:
pcay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRD00_11560
Bacterial motility proteins [BR:
pcay02035
]
Flagellar system
Flagellar assembly proteins
Stator
FRD00_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
IES5
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QED32577
LinkDB
All DBs
Position
complement(3128834..3129574)
Genome browser
AA seq
246 aa
AA seq
DB search
MYRAKRGIRSYQKSSSSNEELEKARQHRALVEEYGSLVRKVAQRILRRLPPYIRGLELED
LVSVGVMGLLDAHERFDPSEGKPFGTFAEFRIKGAILDSLRKHDFFPRRLRQKANKLQKA
EKKLESNLGRAPEPAELAAEMEMDLQELQELRGKVAPYSFVDEADVSFSLTAPTPDPFRL
VNYKETREQLVDCLKGLSERKQLVLDLYFNKELTLAEIGDILDLTPGRVSQLKSAAIKEL
RGVMAG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtatagagccaaacgaggcattcgcagctaccagaagtcgagctcgtcgaacgaggag
ctcgagaaagcgcgccagcaccgcgcgctcgtcgaggagtacggtagcctggtgcgcaag
gtcgcccagcggatcttacgccggctgccgccgtatatccgcggcctggagctcgaagac
ctggtcagcgtcggcgtcatgggcctgctcgacgcccacgagcgcttcgacccgtccgag
ggcaagccctttggcaccttcgccgagttccgcatcaagggcgccatcctcgactccctg
cgcaagcacgacttcttcccacgccggctgcgccagaaggccaacaagctgcaaaaggcc
gaaaagaagctcgagtccaacctgggccgcgcccccgaacccgccgaactcgccgccgag
atggagatggacctccaggagctccaagagctccgcggcaaggtcgccccctactcgttc
gtcgacgaagccgacgtctcgttctcgctcacggccccgacccccgacccgttccgcctg
gtcaactacaaggagacccgcgagcaactcgtcgactgtttgaaggggttgagtgagcgc
aagcagttggtgttggacctgtatttcaacaaggagctcaccttggccgagatcggcgat
atcctcgatttgacgccggggcgggtgagtcagttgaagtcggcggcgattaaggagttg
cggggggtgatggctgggtaa
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integrated database retrieval system
