Persicimonas caeni: FRD00_12255
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Entry
FRD00_12255 CDS
T06769
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcay03009
]
FRD00_12255 (rimO)
Enzymes [BR:
pcay01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FRD00_12255 (rimO)
Ribosome biogenesis [BR:
pcay03009
]
Prokaryotic type
ribosomal protein modification factors
FRD00_12255 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
YajR_YAM
Fer4_12
PG_binding_3
DUF7675
Motif
Other DBs
NCBI-ProteinID:
QED32710
LinkDB
All DBs
Position
complement(3306376..3307815)
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AA seq
479 aa
AA seq
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MQGFTKMTQEKRKKVHMISLGCPKNRVDSEVMVGLIQDDGEFDMVGDADQADIVVVNTCG
FIDDAKEESINTILEMVERKNVGLLDKVVVSGCLSQRYSGDLEVEIPEVDAILGTKTFTA
INEALKGELAEKTYVQPGSFIMDHEVARTNTIRGGTAYLKIAEGCSRSCSYCIIPKIRGT
QESRTIDDVVLEAKRLGQSGVKEIILVAQDMTSYGIDLDPKKNRDYLVRLLRRLDEEATE
VDWIRMLYMYPWNFTDEVLEILQEENRILPYVDMPLQHINQRILKSMRRNIQRDRQAELI
ARLRAVDDLVLRTTFIVGYPGETDAEFQELYDWMEEVRFDRVGIFTYSPEEGTPAAEMDG
QLPEEVKIARRDALMELQQQISLEKNEEWVGYNTEVIVDGVSEQHEAVLEGRHYGQAPDI
DGVVYLSFDYGGDLPTPGDIVEVEIQQATAYDLAGVVIPKERDEGPIRIEEGGVSLAKQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggctttacaaagatgacccaagaaaaacgcaaaaaagtccacatgatctccctc
ggttgccccaaaaaccgggtcgactccgaggtgatggtcgggctcatccaagacgacggc
gagttcgacatggtcggcgacgccgatcaggccgacatcgtggtggtgaatacctgcggg
tttatcgacgacgccaaagaggagtcgatcaacacgatcttggagatggtcgagcgcaaa
aacgtcggcctgctcgacaaggtggtcgtgtcggggtgtctatcgcagcgctactccggt
gacctggaggtcgagatccccgaggtcgacgccatcttgggcaccaagacgttcaccgcg
atcaacgaggcgctcaaaggggaactggccgagaagacctacgtgcagccgggcagcttc
atcatggaccacgaggtcgcccgcacgaacaccattcgcggcggcaccgcctacctgaag
attgccgagggctgttcgaggagctgcagctactgcatcatcccgaagatccgcggcacc
caagagagccgcaccatcgacgacgtggtgctggaggccaagcgtctgggccagagtggc
gtcaaagagatcatcctggtcgcccaggacatgacgagctacggcatcgacctcgatccc
aagaagaaccgcgactacctggtgcgccttcttcgccgcctcgacgaggaggcgaccgag
gtcgactggatccggatgctctacatgtatccgtggaacttcaccgacgaggtcctggag
atcttgcaggaggagaaccgcatcctgccgtacgtcgacatgcccctgcagcacatcaac
cagcgcatcctcaagtcgatgcggcgcaatatccagcgcgaccgccaggccgagctcatc
gcccggctgcgcgcggtcgacgacctggtgctgcgcactacgtttatcgtcggctatccc
ggcgagaccgacgcggagttccaggagctgtacgattggatggaagaggtgcgcttcgac
cgcgtgggcatcttcacctacagccccgaagaaggcacgcccgcggccgagatggacggg
cagttgcccgaagaggtcaagatcgcacggcgcgacgcgctcatggagctgcagcagcag
atctcgctcgaaaaaaacgaggagtgggtcggctacaacaccgaggtgatcgtcgacggc
gtctccgagcagcacgaggcggtgctcgaaggccgccactacggccaggcccccgacatc
gacggggtggtctacctgtcgttcgactacggcggcgacctgccgaccccgggcgacatc
gtcgaggtcgagatccagcaggccaccgcctacgatctggcgggcgtggtcatcccgaaa
gagcgggatgaggggccgattcggattgaggagggtggagtgagtctcgcaaagcagtga
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