Persicimonas caeni: FRD00_12940
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Entry
FRD00_12940 CDS
T06769
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcay03016
]
FRD00_12940
Enzymes [BR:
pcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
FRD00_12940
Transfer RNA biogenesis [BR:
pcay03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FRD00_12940
Prokaryotic type
FRD00_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QED32842
LinkDB
All DBs
Position
3495288..3496211
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AA seq
307 aa
AA seq
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MSVRVVFLGTGSGKPMPHRGVSSVALFRDGKMYMFDCGEGTQVQLSKSSLRPGALESVFL
THFHGDHVNGLPGFVGSLTLNRREDALDIYGPSGLNHWFKALRDLHILWPSFPVHAHEHK
EPGVICKQSDYRVEVRRLRHRVETWGYAFIEEDRPGRFDLDAAKALGVPPGPLYGRLQQG
ETVELDDGRTVAPDQVLGPSRPGLKIAYITDTSPCDGAIELAKDADLVIHEATYPAGNEK
LAHERGHSTAADAAHCARKAGAKRLVLTHLSQKYIRPKEFLAGARDIFPNTDVAEDLMEL
EIKRRDQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgtgtcgtttttctggggaccggaagcggaaagccgatgccgcaccgtggg
gtgtcgtcggtggcgctattccgcgacggaaagatgtacatgttcgactgcggcgagggt
acccaggtccagttgtcgaagtcgtcactgcgccccggcgcgctcgagtcggtctttttg
acccacttccacggcgaccacgtcaacggactgcccggctttgtgggctcactgacgctg
aaccgacgcgaagatgccctcgacatctacggccccagcgggctgaaccactggttcaag
gcgctgcgcgacctgcacattttgtggccgagctttccggtccacgcccacgagcacaaa
gagccgggcgtgatctgcaagcagagcgactaccgcgtcgaagtccgccggctccgccac
cgcgtggagacctggggctacgccttcatcgaagaagaccgccccggccgcttcgacctc
gacgccgccaaggcactaggcgtgccgcccggcccgctgtacggccgcctgcaacaaggc
gagacggttgaactcgacgacggccgcacagttgctcccgaccaggtgctcggcccgtca
cgccccggcctcaagatcgcctacatcaccgacacctcgccgtgcgacggcgccatcgag
ttggccaaagacgccgatttggtcatccacgaggcaacctaccccgccggcaacgagaag
ttggcccacgaacgcggccactccaccgccgccgacgccgcccactgcgcccgcaaagcc
ggcgccaagaggctcgtgctcacgcacctgtcccagaagtatatccgccccaaagaattc
ttggcaggcgcccgggatatcttcccgaacaccgatgtcgccgaggatttgatggagttg
gagatcaagcgccgcgatcagtag
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