KEGG   Persicimonas caeni: FRD00_12945
Entry
FRD00_12945       CDS       T06769                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pcay  Persicimonas caeni
Pathway
pcay03030  DNA replication
pcay03410  Base excision repair
pcay03420  Nucleotide excision repair
pcay03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FRD00_12945 (polA)
   03410 Base excision repair
    FRD00_12945 (polA)
   03420 Nucleotide excision repair
    FRD00_12945 (polA)
   03440 Homologous recombination
    FRD00_12945 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcay03032]
    FRD00_12945 (polA)
   03400 DNA repair and recombination proteins [BR:pcay03400]
    FRD00_12945 (polA)
Enzymes [BR:pcay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FRD00_12945 (polA)
DNA replication proteins [BR:pcay03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FRD00_12945 (polA)
DNA repair and recombination proteins [BR:pcay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FRD00_12945 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FRD00_12945 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 DHC_N2 nSTAND_NTPase4 DUF3509
Other DBs
NCBI-ProteinID: QED32843
LinkDB
Position
complement(3496392..3499151)
AA seq 919 aa
MPNSNTLYIVDGSSYIFRAFYAIRNPLTTSKGLPTNGIYGFTQMLIKLLRAEDPKYIAVT
FDAHSAEKTNFRKEMYEEYKANRSKMPDDLKVQLPYFHKVVEAMRIPLKEQAGVEADDVI
ATMTKKAREEGLEVCIISADKDLMQLLSDHVSMLDTMRDKKYTPEDVQERFNVSPDKVRY
VLALAGDSSDNIPGVPGIGEVTGGRLIDEFGDLETLLANIDKVGGKKRKQNLTEFADQAR
LSLDLVTLRDDCDVELDLDRLKLTPPDMDDLTALFSELEFETPLREVRQWMDEHDWLEED
QMAFDFSSIGPETHDHESSDKNYRAIFTEEELDEVLAALDDVDRFAFDLETTSLDPLDAK
ICGMSFAWNQGEAVYIPCAHAYDGAPTQLDIDTVLEKVRPYLEGDDKKVVGQHLKYEWLV
LRKYGIDLTAIKYDTMLMSYLLDPGKNSHSLDTLARDLFNYNTITFEDVAGKGKNQVTFD
QVDLEEATPYAAEDADLTLMICNELEPELIDAELDELHDKLEVPLTRVLGIMEATGVRID
HDMLGELSEEFEKELQELQDQIDELSGGPTNPNSPKQLREVLFDKLGLPVKKRTKTGPST
AASVLEELSELHELPELILEYRSFSKLKGTYVDALPELIREDTGRIHTDFNQAVTATGRL
SSSNPNLQNIPMRTARGRQIRKAFVPDAGSKLLVADYSQIELRILAHMSQDPLLLEAYGS
GADIHRLTASQIFDVEFDEVTPEQRGAGKTINFGVLYGMGSRRLARELDISQSDAKQYID
NYFEKYAKVTDFFDELVERARDTGYAETMFGRRRLLPELTQTSRRQQAFAERAAVNTPIQ
GTAADIIKYAMVNLQKQIEADELPMRMLLQVHDELVFEVEDDFVDEARDIVREGMEGVCE
MDVPLEVDLGVGDNWLDAK
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgcccaactccaacaccctctacatcgtcgacggctcctcgtatatttttcgggccttc
tacgccatccgcaaccccttgacgacctctaagggcctgccgaccaacggcatctacggc
ttcacgcagatgctcatcaagctgttgcgcgccgaagatcccaagtacatcgcggtcacc
ttcgacgcgcacagcgccgagaagaccaacttccgcaaggagatgtacgaggagtacaag
gccaaccgctcgaagatgcccgacgacctgaaggtgcagcttccgtactttcacaaggtg
gtcgaggcgatgcgcatcccgctcaaagagcaggccggggtggaggccgacgacgtcatc
gccacgatgaccaagaaggcgcgcgaagagggactcgaggtctgcatcatcagcgccgac
aaagacctgatgcagctgctctccgatcacgtgagcatgctggatacgatgcgtgacaag
aagtacacgcccgaggacgtccaagagcggttcaacgtctcgcctgacaaagtgcgctac
gtcttggcactcgccggggatagctccgacaatattccgggggtgccaggcatcggagag
gtaaccggcgggcggctcatcgacgagtttggcgacctggagaccctgcttgccaacatt
gacaaagtcggtggcaaaaagcgcaagcaaaacctgaccgagttcgccgatcaggctcgc
ctgtcgctcgacttggtcaccctgcgcgacgactgcgacgtcgagctcgatctcgaccgc
ctcaagctcacgcccccggacatggacgatctgaccgcgctcttctccgagctcgagttc
gagacgccgcttcgcgaggtgcgccagtggatggacgagcacgactggctcgaagaagac
cagatggcgttcgacttctcgagcatcggccccgagacccacgaccacgagtcgagcgac
aagaattatcgggcgatcttcaccgaagaggagctcgacgaggtcttggccgccctcgac
gacgtcgaccggttcgcgttcgacctggagacgacgagcctcgacccgctcgacgccaag
atttgcggcatgagcttcgcttggaaccaaggcgaggccgtctatatcccgtgtgcgcac
gcttatgacggagcgcccacgcagttggacatcgacacggtgctcgagaaggtgcgcccc
tacttggaaggcgacgacaagaaggtcgtcggccagcacctgaagtacgagtggctggtg
cttcgcaagtacggcattgatctaaccgccatcaaatacgacacgatgctgatgagttac
ctgctcgatccgggtaaaaactcgcacagcctcgatacgctggcgcgcgatctgttcaac
tacaacacgatcaccttcgaagatgtggccgggaagggcaaaaatcaggtcaccttcgac
caggtcgacctcgaggaggcaacgccgtatgccgccgaggacgcagatctgacgctgatg
atctgcaacgagctcgagcccgagctcatcgacgcggaattggacgagctgcacgacaag
ctcgaggttccgttgacccgcgtactcggcatcatggaagccacgggcgtgcgcatcgac
cacgacatgctcggtgagctgagcgaggagttcgaaaaggagctccaagagctgcaagac
cagatcgacgagctctctggcggcccgaccaacccgaatagccccaagcagcttcgcgaa
gtgctcttcgacaagctcggcctgccggtcaaaaagcgcaccaagaccggcccgtcgacc
gcggcgtcggtgctcgaggagctaagcgagctgcacgagctccccgagctgatcttggag
taccgctcgttctcgaagctcaaaggcacctacgtcgacgcactgccggagctcatccgc
gaggacaccggacgcatccacaccgacttcaaccaggcggtcacggccaccggccggctc
tcctcgtcgaacccgaacctgcaaaatatcccgatgcgcaccgcgcgcggccgtcaaatc
cgcaaggcgttcgtgcccgacgctggctcgaagcttctggtggccgattactcgcagatc
gagcttcgcatcctagcgcatatgtcccaagacccgctcctgctcgaggcgtacgggtcc
ggcgcggatatccaccggctgaccgcctcgcagatcttcgacgtcgagttcgacgaggtg
acccccgagcagcgaggcgccggcaagacgatcaacttcggcgtcctctacggcatgggc
tcgcgccgactcgcccgcgagctcgacatctcgcaatcggacgccaagcagtacatcgac
aactacttcgagaagtacgccaaggtcaccgacttcttcgacgaactcgtcgaacgcgcc
cgcgacacgggctacgccgagacgatgttcggccgccgccggctgctccccgagctcact
caaacgagccgccgccagcaggccttcgccgagcgcgccgcggtcaacaccccgattcag
ggcaccgccgccgacatcatcaagtacgccatggtcaacctgcaaaagcagatcgaggcc
gacgagcttcccatgcgcatgctgcttcaggtgcacgatgaattggtcttcgaggtcgag
gacgacttcgtcgatgaggcgcgcgacatcgtgcgcgagggcatggagggcgtctgcgag
atggacgtgccgctcgaggtcgacctgggcgtgggtgacaactggctggatgcgaagtga

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