KEGG   Persicimonas caeni: FRD00_13060
Entry
FRD00_13060       CDS       T06769                                 
Symbol
alr
Name
(GenBank) alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
pcay  Persicimonas caeni
Pathway
pcay00300  Lysine biosynthesis
pcay00470  D-Amino acid metabolism
pcay00550  Peptidoglycan biosynthesis
pcay01100  Metabolic pathways
pcay01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FRD00_13060 (alr)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FRD00_13060 (alr)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FRD00_13060 (alr)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    FRD00_13060 (alr)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pcay01011]
    FRD00_13060 (alr)
Enzymes [BR:pcay01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     FRD00_13060 (alr)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     FRD00_13060 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:pcay01011]
 Precursor biosynthesis
  Amino acid ligase
   FRD00_13060 (alr)
  Racemase
   FRD00_13060 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase_C Mur_ligase Sde182_NH-like VPS8_N
Other DBs
NCBI-ProteinID: QED32865
LinkDB
Position
3522705..3525236
AA seq 843 aa
MSQSPQLTLEQIARLTGGELLCGDADLVISEIGTDSRAPFAQNSLFVALDGEHFDGHRFI
TEASEKGAAAALVSHGDPLAYPDVALIRVDDTLEALQRLAASWRGLFDVPVVGITGSNGK
TIVKDMLASILAQEQTVFRSPGSYNSQIGVPLSLLGIRPEHDIAVIEAGISRIGEMERLE
PMIRPTLGIITNIGLAHAAGLNDLATTAREKLELFANLDDRPLIYPAESKPLGRYKLPGT
PVSFAIAPGKDAPGDEKTDADYLVERVAQTSQGFAFSVQFPDGAHHPFALNVPGRHNLAN
AAAAIAAADTLGVSVEAIREGLAAFELSPLRLEMHTTQEGVTFINDAYSSDPVSARAALS
VLEHYAGQQRAIAILGDMLDLGARSTAAHRQLGQVVAHTGIDRLICYGERAQTIGKAAQT
AGMTADHIDCVDSIDTLHDLLERELRSGDVVLFKASRTMGLERAAERLLESVAPARLYID
LNAIRDNYHAIRRHVGDGTGLIAVVKSFGYGNDSTRVSQTLAREGVDALAVAYADEGIPL
RKRGLTLPILVTNALASEADKLVKYDLTPLVYSRGVVDALRTQARRFSKRVHVHLEVDTG
MNRVGLKPDETLSFARELAAIDEIVIEGLMTHFAAADDPDEDAFTRQQIDTFKTVLDQLH
AEGIHPNVVHAANTAGAWRFPDAHFDRVRVGLGLYGLSPTPAVSRETDGTHAALAFTTRI
IHLKDVAAGETVGYNRTWTAEQPRTIATIAAGYNDGFPRFMSNGGEVLIGGRRCPVVGNV
CMDVSMVDVTDVPNAKVGDEVVIFGHQGSEAITVDEIAGRGGTISYELLCNISPRVRRIF
VRQ
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgtcacaatcgccacagctcaccctcgagcagatcgcccggctcaccggcggcgaactt
ctgtgcggcgatgcagacctcgtcatcagtgaaatcggcaccgactcacgagctcccttt
gcgcaaaatagcctctttgtcgctctcgacggcgagcacttcgacggccatcgctttatc
accgaggcgagtgagaagggcgccgctgccgcgttagtgagccacggtgacccattggct
tacccagatgtggcgctcatccgagtcgacgatacgctcgaggccctccagcgactcgcg
gccagttggcgcggactcttcgacgtcccggtggtcggcattaccggctcgaacggcaag
acgatcgtcaaagacatgctcgccagcatcttggcgcaagagcaaaccgtctttcgcagc
cccggcagctacaactcgcagatcggtgtgccgctctcactgctcggcatccgccccgag
cacgatattgccgtgatcgaagcgggcatcagccgtatcggtgaaatggagcgtctcgag
ccgatgattcgcccgacgctgggcatcatcaccaatatcgggctcgcccacgccgccggc
ctcaacgacctcgccaccaccgcgcgcgagaagctcgaactttttgccaatctggacgac
cgcccgctgatctatcccgccgagagcaagcccctggggcgttacaagctgcccggcacc
cctgtgtcatttgccatcgcacctggcaaagatgctcctggcgacgaaaaaaccgacgct
gattatctggtcgagcgagtcgcgcagacctcccaggggtttgcattctcggtgcaattt
cccgacggcgcacatcacccgttcgccctcaacgtgcccggtcgccacaacctagcgaac
gcggcggcggcgatcgcagctgccgatactcttggtgtgtctgtcgaggccattcgcgag
ggcttggctgccttcgaactgagtccgttgcgcctcgagatgcacaccacccaggagggt
gtcaccttcatcaacgacgcctacagctccgatccggtgagcgcgcgggccgcgctgagt
gtgctcgagcactatgccggccaacagcgcgcaatcgccatcttgggcgatatgctcgat
ctcggcgcgcgctcgaccgccgctcaccgtcaactcggccaggtggtcgcacacacgggc
atcgaccggttgatctgctacggcgagcgcgcgcagaccatcggcaaagcggcgcaaact
gccggcatgacggccgatcacatcgactgcgtcgactccatcgacacgctgcacgacctg
ctcgagcgcgaattgcgctcgggcgacgtggtgctgttcaaggcgagccgcaccatggga
ctggagcgcgccgccgaacgcctcctcgagagcgtggcgccggcccggctctacatcgac
ctcaacgccatccgcgacaactatcacgccattcgccgccatgtcggcgacggcacgggg
ctgatcgccgtggtcaagagttttggctacggcaacgactcgacgcgcgtctcgcagacg
ctcgcccgcgagggggtcgacgcgctcgccgtcgcatacgccgacgagggcatcccactt
cgaaaacgcggcctgacgctgccaatactggtcaccaacgccctcgcgtccgaggcggac
aagctcgtcaaatacgacctcaccccgctggtctactcgcgaggagtcgtcgacgcgctt
cgcacccaagcgcgccgcttctctaaacgcgtgcacgttcacctcgaggtcgacaccggc
atgaaccgcgtggggctcaagcccgacgagaccttgagcttcgcccgcgagttggccgcg
atcgacgagatcgtcatcgaagggctgatgacccacttcgccgccgccgacgaccccgac
gaggacgccttcacccgccaacagatcgacaccttcaaaacggtgctcgaccaactgcac
gccgaaggcatccatccgaatgtggtccacgccgccaacaccgccggcgcctggcgcttt
cccgacgcccatttcgaccgcgtgcgcgtgggactcggtctctacggcctctcgccgact
cctgccgtttcacgtgaaacagacggtacacacgcggcgctagccttcaccacccgcatc
atccacctcaaagacgtcgccgccggcgaaacggtcggctacaaccgcacctggaccgcc
gagcagccccgcacgatcgccacgatcgccgccggctacaacgacggcttcccccgcttc
atgtccaacggcggcgaagtcctcatcggcggccggcgctgcccggtcgtcggcaacgtc
tgcatggacgtgtcgatggtcgacgtgaccgacgtccccaacgccaaggtaggcgacgaa
gtagttatcttcgggcaccaaggcagcgaggcgatcaccgtcgacgaaatcgctgggcgc
ggggggacgatcagctacgagctcctgtgcaatatctcgccgcgcgtccgacgcatcttc
gttcggcagtga

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