KEGG   Persicimonas caeni: FRD00_13445
Entry
FRD00_13445       CDS       T06769                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pcay  Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcay03400]
    FRD00_13445
Enzymes [BR:pcay01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FRD00_13445
    5.6.2.6  RNA 3'-5' helicase
     FRD00_13445
DNA repair and recombination proteins [BR:pcay03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FRD00_13445
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: QED32936
LinkDB
Position
complement(3616943..3619018)
AA seq 691 aa
MSGESASDGAGSDERRVRALLRHTWHAFFGRFGRLTEAQAKAAAPVARGESAVLCAPTAS
GKTEALVAPMMERCFGSGTASKEALRLVVVCPTRALCNDFLRRVRRPVEACGWTVDLKTG
DSPSFSADAPPQLLVTTPESLDSLLSRQPAALKGIAGIFLDEIHLLDGSPRGDHLLALVW
RLRSFRPELQVCCASATAADAERLADEWCGAGGKGARVVRVEGGRDRELQALFEKIIDPF
EAARALERLMHDEPGSKTLVFANTRAEVEWLSATLAASLGATKVFAHHGSLAKAERLRAE
KGFLRAGSGVCVATMTLELGIDIGDVDRVVLVNPPPNVASFTQRVGRSNRRGGAIRVVCL
HSTAFDRMRFEHQIACARAGKLFVEPQVFRPTMLPQQAVSLIFQNPRGWVSAKALHKRLP
PSAQKMWSRADCEDVLEVMRAEGYLHADSQGRFVADQPARKDWRHGRIHAHIGDDAEVEV
VDETTGRTIGTAHWSGDDVSRADADGEGILLGGKGRKVTRVRDRRVFVEAGAMDEAPSFL
SRMGPNYSFALARDLAAFADLGDDTLWLSRTGGHISRHDEWRLEHFFGTLWGQLLAAVLR
SHGFRFKRVGAFHATVTRRPRRLPKNLGTPAAIESTVDDYLEKGYKKLAKRLQPGPWKRF
VPPDLMRRWVRACMRPEEFAQVVAGFRICDA
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgagcggcgagtcggcatcggatggggcggggtcggacgagaggcgcgtgcgcgcgctg
ttgcggcacacctggcacgcctttttcgggcggtttggccggctgaccgaggcgcaggcc
aaggccgcagcgccggtggcacgcggcgagtcggcggtgttgtgcgcgccgacggcgtcg
ggcaagaccgaggctctcgtggcgccgatgatggagcgttgttttggttcgggcacggcc
tcgaaggaggcgcttcgactggtggtggtgtgcccgacacgcgctctgtgcaacgatttt
ttgcgccgggtgcgccggccggtggaggcgtgcgggtggacggtggacctgaagacgggc
gacagcccgtcgttttcggccgacgcgccgccccaactgctggtgacgacgcccgagtcg
ctcgactcgctgttgagccgccagccggccgcgctcaaggggatcgcggggatcttttta
gacgagattcacctgctcgacggcagcccgcgcggcgatcatctcttggcgttggtttgg
cgcctgaggagctttcggcccgagctgcaggtgtgctgcgcctcggccacggccgccgac
gccgagcggcttgcggatgaatggtgcggtgctggaggtaagggcgctcgggtggtccgc
gtcgagggtggccgcgaccgcgagttgcaagcgctcttcgagaagatcatcgatccattc
gaggcggcgcgcgccctcgagcggctgatgcatgacgagccgggctcgaagacgctcgtc
ttcgccaacacccgcgccgaagtcgagtggctgtcggccacactcgccgcaagcctgggc
gccacgaaggtcttcgcccaccacggaagcctggccaaagccgagcggctgcgcgccgag
aagggctttttgcgggcgggcagcggggtgtgcgtggccacgatgacgctcgagctgggc
atcgacatcggcgacgtcgaccgggtcgtgctggtcaacccgccgcccaacgtcgcctcg
ttcacccagcgggtgggccgcagcaaccgccgagggggcgcgatccgggtggtttgcttg
cactcgaccgcgttcgaccggatgcgcttcgagcaccagatcgcgtgcgcccgggcgggc
aagctctttgtcgagccgcaggtctttcgcccgacgatgctcccgcagcaggccgtctcg
ctgatcttccagaaccccaggggctgggtgtcggccaaggcgctccacaagaggctgccg
ccgagcgcccagaagatgtggtcgcgcgctgattgcgaggacgtgctcgaggtgatgcgc
gccgagggctacctgcacgccgattcgcagggacggttcgtagccgaccaaccggcgcgc
aaggactggcgccacggccgcatccacgcccacatcggcgatgacgccgaggtcgaggtg
gtcgacgagaccaccggacgcaccatcggcaccgcccactggagcggcgacgacgtgtcg
cgcgccgacgctgacggcgaagggatcttgctgggcggcaagggccgcaaggtcacccgc
gtgcgcgaccgacgcgtgtttgtggaggcgggggcgatggatgaagccccgagcttcctg
agccgcatgggccccaactactcgtttgcgctcgcgcgcgacctcgccgccttcgccgac
ctaggcgacgacaccctctggctgagccgcaccggcggccacatctcgaggcacgacgaa
tggcgcctcgagcacttcttcggcaccctgtggggccaactcctggccgcggtgctgcgc
agccacggattccggttcaaacgcgtcggcgccttccacgccaccgtcacccgccgccct
cgccgcttgcccaagaacctgggcacgcccgccgccatcgaatcgacggtcgacgactac
ctcgagaagggctacaaaaagctcgccaagcggctgcaacccggcccctggaagcgattc
gtcccccccgacctgatgcgccgctgggtgcgcgcgtgcatgcggcccgaggagttcgcg
caggtggtggcggggtttcggatatgtgatgcgtag

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