Persicimonas caeni: FRD00_13640
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Entry
FRD00_13640 CDS
T06769
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRD00_13640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_13640
Enzymes [BR:
pcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FRD00_13640
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRD00_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
NPHP3_N
ResIII
INT1_R3
SNAPC1
Motif
Other DBs
NCBI-ProteinID:
QED32974
LinkDB
All DBs
Position
complement(3673160..3676705)
Genome browser
AA seq
1181 aa
AA seq
DB search
MIETYRIKKPATLAQIPHDNHAVIEASAGTGKTYTIEHMVIDLLLANEDLRISQILIVTF
TERATYELTARIRKLLQGIVDADPKLLAKDYETEAWEIDTKRRRRLQKALSSFDMAPIHT
IHGFCHRVLTENAFQNHRLFDQDHTDFDVLFERVFKEALRREFAHKDEFRPYLAAWLEAK
NPAVDKLERMLSRCVRTRAEIRPKFDEMALARALDAFGERDAKAIADALKAELKEEGVHH
ATIRATVKRVTGIMEALDAFRTSGDVVQFLALAGEKKTYEYLDEKLGEYAFAGPVGQMVR
RAFEAVVPLEAAIVEKFLPTLERMLRQYKEEEGHFSYDDMLSFVWESLESPRGQSLVEVL
RGRYKYALIDEFQDTDDLQWKIFRRIFHESELENIFYLIGDPKQAIYSFRGADVYTYLDA
KKTVLDAGGTLVRLGDNWRSSQGVVSAYNHIFEQDAQPPYFTGEITYDTPVECALPDRMA
FRADGEPATPITLVQLMDPDLNATRVREGFAAYFASEIRALLDDSSSSDGGLFVREDVNS
DKERISARDIFVLTRSRSEGRYIAEYLRREGVPYAFFKQDGLFQTPEALHVYDLLQGIAH
PHDRSKRLKAWLTPFFGLDIEALADTDEMSDTDPLVRDLFDWKQAADKRYFESLFNSVLR
RSGLLRREIFTKTSERELTNYLHIFEILLEEANRSGFDLSELVLRLKAFIEERQTPEGED
GNVQRLETDRDAVQIMTMHKSKGLEAEVVFIYGGFGRAPSGSLHAFHEDDGRPVLHIGSP
PQSSRDKWEREQREEEQRLMYVALTRAKSRIYLPYVGFENEPDQEDGLDKRDYNIDGTYA
ALLPRLDTITRNLQDPVDGWFELEQVEYAQTLRVRDVAAQMQALRQWQMPDDLPRPFDDA
MFRPLRSRRHTVSSYSRIKGERERHLEIDADEFKADGGQPVAALLPDDALPGGKRAGVFL
HELVENLDFERVRGHQDLESWLDDAQIEDDFRACMRQYGVGEEYLAYCKKLVWSSVTTPL
STEAVELPCIAQCDRTLRELEFLYPIPERSHARIDEIAEDERTEFAIERGYIKGFIDLLF
ETGGKIYFADWKSDILAEYSPHTLDRHVAERYGIQATIYALAVVKFLEIHDEEAYEERFG
GYLYLFMRGMDAENGHGVYYGRPSWDDVRRYEEHLRERVRY
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagacgtaccgaatcaagaagcctgccaccctcgcgcagatcccccacgacaat
cacgccgtgatcgaggcgtcggccggcaccggcaagacgtacaccatcgagcacatggtc
atcgacctcttgctcgccaacgaggacttgcgcatctcgcagatcttgatcgtcacgttc
accgagagggcgacctacgagctgaccgcgcgcatccgaaagctcttgcagggcatcgtc
gacgcagatccgaagctcttggcgaaggattacgagactgaagcttgggagatcgacacc
aagaggcgccgacggctgcaaaaggcgctgtcgtcgttcgacatggcgccgatccacacc
attcacggcttctgccaccgcgtgctcaccgaaaacgccttccagaaccatcggctcttc
gaccaagaccacaccgacttcgatgtgctcttcgagagggtcttcaaggaggcgctgcgg
cgcgagttcgcccacaaagacgagtttcgcccgtacctggccgcctggctcgaggcgaag
aaccccgcggtcgacaagctcgagcgcatgttgtctcgctgcgtgcgcacgcgcgccgaa
atccggcccaaattcgacgagatggcgctcgcccgcgctctcgatgcgttcggcgaacgc
gacgccaaagcgatcgccgacgcgctcaaagccgagctcaaagaagaaggcgtccaccac
gccacgatccgcgcgaccgtaaagcgcgtgaccggcatcatggaggcgctcgacgccttc
cgcacctccggcgacgtcgtccaattcctggcgctcgccggggagaagaagacctacgag
tacctcgacgaaaaactcggcgagtacgcctttgccggccccgtcggccagatggtgcgc
cgcgccttcgaggcggtcgtgcccctcgaagccgccatcgtcgagaagttcttgcccacg
ctcgagcgcatgttgcgccagtacaaagaagaagaggggcatttctcctacgacgacatg
ctcagcttcgtgtgggagagcctcgagagcccgcggggccagagcctcgtcgaggtgctg
cgcggccgctacaagtacgcgctcatcgacgagttccaggacaccgacgacctgcagtgg
aagatctttcggcgcatcttccacgagagcgaactcgagaatatcttctacctcatcggc
gaccccaagcaggcgatctacagcttccgcggcgccgacgtctacacctacctcgacgcc
aagaagaccgtgctcgacgccggcggcacgctcgtacgcctgggcgacaactggcgctcc
tcgcagggcgtcgtgtcggcctacaaccacatcttcgagcaggacgcccagccgccctac
ttcaccggcgagatcacctacgacacgcccgtcgagtgcgcgctgcccgaccgcatggca
ttccgggccgacggcgagccggccacgcccatcacgctcgtccagttgatggacccggac
ctgaacgccacgcgcgttcgcgagggcttcgccgcctatttcgcctccgagatccgcgcg
ctgctcgacgactcgagttcgagcgacggggggctcttcgtgcgcgaggacgtcaactcg
gacaaagagcgcatctcggcgcgcgatatcttcgtgctgacccgatcgcgctccgagggg
cgctatatcgccgagtacctgcgccgcgagggcgtcccgtacgccttcttcaaacaagac
gggctcttccagacgcccgaggcgctgcacgtctacgacctgctgcagggcatcgcccac
ccgcacgaccgctcgaagcgcctcaaggcttggctcaccccgttcttcggcctcgacatc
gaggcgctcgccgacaccgacgagatgtcggacaccgacccgttggtgcgcgacctgttc
gactggaagcaggccgccgacaagcgctacttcgagagcctattcaactcggtgctgcgc
cgaagcgggctgttgcgccgtgagatctttacgaagacgagcgagcgcgagctcaccaac
tacctgcatatcttcgagattctgctcgaggaggccaaccgcagcggctttgatttgagc
gagctcgtcttgcggctcaaggcgttcatcgaagagcgccagacgcccgagggcgaggac
ggaaacgtccagcgcctggagaccgaccgcgacgccgtgcagatcatgacgatgcacaag
tcgaagggcctcgaggccgaagtcgtcttcatctacggcggcttcgggcgcgccccgtcg
ggcagcctgcacgcctttcacgaggacgacggccgccccgtgctccacatcggctcgccg
ccgcagagctcgcgcgacaagtgggagcgcgagcagcgcgaggaggagcagcggctgatg
tacgtggcgctcacccgcgccaagtcgcgcatctacctgccgtatgtgggcttcgagaac
gagcctgaccaagaagacgggctcgacaagcgagactacaatatcgacggcacctacgcc
gcgctcttgcccaggctcgacaccatcacgcgcaacctgcaggacccggtcgacggctgg
ttcgagctcgagcaggtcgagtacgcccagacgctgcgcgtgcgagacgtcgccgcccag
atgcaggcgcttcgccaatggcagatgcccgacgacctgccgcgccccttcgacgacgcg
atgttccgcccgctgcgctcgcgccggcacacggtcagctcgtatagccgcatcaaaggc
gagcgcgagcgccatctggagatcgacgccgacgagttcaaggccgacggcggccagccc
gtcgccgcgctgctccccgacgacgccctgccgggcggcaagcgcgccggtgtgttcctg
cacgaactcgtcgagaacctcgacttcgagcgcgtgcgcggtcaccaagacctggagagt
tggctcgacgacgctcagatcgaagacgacttccgcgcctgcatgcgccaatacggcgtc
ggcgaggagtacctcgcctattgcaaaaagctcgtctggagctcggtcaccacgccgttg
agcaccgaggccgtcgagctcccctgcatcgcccaatgcgaccgcacgctgcgcgagctc
gaatttctctacccgatccccgagcgctcccacgcgcgcatcgacgaaatcgccgaagac
gagcgcaccgaattcgcgatcgagcgcggctacatcaagggcttcatcgacttgttgttc
gaaacgggcggcaagatctacttcgccgactggaagagcgacatcctcgccgagtacagc
ccccacacgctcgaccgccacgtcgccgagcgctacggcatccaggcgaccatctacgcg
ctcgcggtcgtcaaattcttggagatccacgacgaagaggcatacgaagagcgcttcggc
gggtatctatacctgttcatgcgcggcatggacgccgagaacggccacggtgtgtactac
gggcggccgagctgggacgatgtccgccggtacgaagagcatttgagagagcgggttcgc
tactag
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