Persicimonas caeni: FRD00_13645
Help
Entry
FRD00_13645 CDS
T06769
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRD00_13645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_13645
Enzymes [BR:
pcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FRD00_13645
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRD00_13645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QED32975
LinkDB
All DBs
Position
complement(3676898..3680485)
Genome browser
AA seq
1195 aa
AA seq
DB search
MLQVFYSNHLERLVDALVEATTLERKRLKLSPFDRTPVVVPNWNVEAYLKFEVARRKGIA
AHMEYRQLIEFFESLLPTSGEYRILDDQTLQLLLIDALGDKKLLARKDLAPVQGYLSAAG
DDRDSLELRRFQLSAHLAELFREYDYARPEMVAEWPESPQFRDPHWRRIERWQRALWLDL
FAPDGRVAKLADEKGAAYIRLPEIFERVPADALQIPKSVHLFAMNKLGRVFEGLLGVLGE
RTEVHLWSLNPCREFWEDVVTDIDEEAELLSSKAVDGGQLVLAGAAPDLRDEDFWEPEKF
PLPLRLWGRAGRDQVRMLNRLCGHDPRTLFEEPAIDSVLTQVQQDVLDLAPEREEPIDAL
DDDSITVLACPGIQREAEIIANEIWALMRGERHMWDDKPLQFNEIAVIVNRDQRVEYQTH
LEAVFRDVYDIPFNIVDLQANADSRLVEALELLLDLPFGNFKRRELLKLLTHPNVIAKFD
DVEPQTWLRWCDELNIFHGADHTDHADTYIERDLFNWDQGLKRLVLGGFMTGEPSGDDRA
FRHEQFHYLPHEYAHGESTSAARLVMCARSLIADARRCRREEHTLAEWFERIGEMVENYL
APAHDDEEFEFMRCRRLLGDLADLDVTGRKMPYRVAREFLGRALGELEGRRGQYLADGVV
VSSFLPARPMPFRAVFVAGMGESYFPSSDGGDPLDLRQVKWQEGDAGRRDRDKYAFLQTL
LSTRERFYASYVSRDSRTGEALEPSSVVRDLLHMLEQSYLGREKTAACVREHPLRRFDAA
YFDRDDSDEESEFGTVYHPEARREAAAFALRESLREHCRRYNVPFPELPILEKAVAEPLR
NQVGAVLGTYAQPKAQAPDEDLLEVSLSFSQLRQFLESPLQASARWILGLRSDDDQDLLD
VEDEVFESSYVSSLLFARDVFWETITEHAPDDNPAFLPIYEQKARYLELKGELPTGPFHE
GERKKQLELLETWRANLAKLGVPGEAPLEVKRIGRAERHAPLDEIWDSISFELVLDDQPV
RVELYGETEALDNTHGTAVTLVSRSRVKDKDFLRGFFTQVGLAASGKIDEDRPFDLVVAP
GKSLARARKLSKYKKRLAPISQADALAYLETLTADFLSGVHAYLMPIEAVFEYFDPENET
PFDELVEMQLNNRWSTCSSEYGPVRQPARFEAPQDADRLLQRRYAPFFKRLGGGE
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggtcttctactccaaccatctcgagaggctggtcgacgcgctcgtcgaggcg
accacgctcgagcgcaagcggctcaagctgagtccgttcgaccgcacgccggtggtggtg
ccgaactggaacgtcgaggcgtacctcaagttcgaggtcgcccgccgcaagggcatcgcg
gcgcatatggagtaccgccagctgatcgagtttttcgagtcgctgttgcccaccagcggc
gagtaccggattctcgacgaccagaccctccagcttctgctcatcgacgcgctcggcgac
aaaaagctgttggcacgaaaggacttggcgccggtccagggctacctctccgccgccggc
gacgaccgcgactcgctcgagcttcgccgcttccagttgagcgcgcacttggccgagctc
ttccgcgagtacgactacgcgcgtcccgagatggtcgccgagtggcccgagagcccccaa
tttcgcgacccgcactggcggcgcatcgagcgctggcagcgcgccctctggctcgatctg
ttcgcccccgacggccgcgtcgccaaactcgccgacgaaaagggcgccgcatatataagg
ctgcccgagatcttcgagcgcgtccccgccgacgcgctgcagatccccaagagcgtccac
ctcttcgcgatgaacaagctcgggcgcgtcttcgagggccttctgggcgtgctcggcgag
cgcaccgaggtccacttgtggtcgctcaacccgtgccgtgagttttgggaggacgtggtc
accgacatcgacgaggaggccgagctgctgtcgagcaaggcggtcgacggcgggcagctc
gtgctcgccggggccgctccggacctgcgcgacgaggacttttgggagcccgagaagttc
ccactgccgctcagactgtggggccgcgccgggcgtgaccaagtgcgcatgctcaaccgg
ttgtgcggccatgacccgcgcacgctcttcgaggagcccgctatcgacagcgtgctgacg
caggtccagcaggacgtgctcgacctcgctcccgagcgcgaagagcccatcgacgcgctc
gacgacgacagcatcaccgtgctcgcctgccccggcatccagcgcgaggccgagatcatc
gccaacgagatctgggcgctgatgcgcggcgagcgccacatgtgggacgacaagccactg
caattcaacgagatagccgtcatcgtcaaccgcgaccagcgcgtcgagtaccagacccac
ctcgaggcggtcttccgcgacgtctacgacatcccgttcaacatcgtcgacctgcaggcg
aacgccgacagtcggctcgtcgaggcgctcgaactgctgctcgacctgccattcggcaac
ttcaagcgccgcgagctgctcaagttgctcacgcacccgaacgtcatcgccaaattcgac
gacgtcgagccgcagacgtggcttcgttggtgcgacgagctcaacatcttccacggcgcc
gaccacacagaccacgccgacacctatatcgagcgcgacctgttcaactgggatcagggc
ctcaagcgcctggtactgggcgggtttatgaccggcgagccgagcggtgacgaccgcgcg
ttccgccacgagcagttccactacctgccccacgagtacgcccacggcgagtcgacgagc
gccgcccgattggtgatgtgtgcccgctcgctcatcgccgacgcccgccgctgccgccgc
gaagagcacacgctcgccgaatggttcgagcgcatcggcgagatggtcgaaaattacctc
gcgccggcccacgacgacgaggagttcgagttcatgcgctgccgtcgcctgctcggcgac
ctggccgacctcgacgtcaccggccgcaagatgccctaccgcgtcgcccgcgaatttttg
ggccgtgcgctcggcgagctcgaaggccgccgcggccaatacctcgccgacggtgtggtc
gtctcgtcattcttgcccgcgcggccgatgcccttccgcgccgtcttcgtcgccggcatg
ggcgagtcgtatttcccgtcctccgacggcggcgacccgctcgaccttcgccaggtcaaa
tggcaagagggcgacgccggccgccgcgaccgcgacaagtacgcctttttgcagaccctg
ctgtcgacccgcgagcgcttctacgcaagctacgtctcgcgcgacagccgcaccggcgaa
gccctcgagccgtcgtcggtcgtgcgcgacctgctgcatatgctcgagcagagctacctc
ggccgggaaaagaccgccgcgtgcgtgcgtgagcacccgcttcggcgcttcgacgcggcc
tattttgaccgggacgactccgacgaggagagcgagttcggcacggtctaccatcccgaa
gcccggcgcgaggccgccgccttcgccctgcgcgagagcctccgcgagcattgccgccgg
tacaacgtgccctttccggagcttccgatcctcgaaaaggccgtcgccgagccgctgcga
aaccaggtcggcgcggtgctcggcacctacgcacaacccaaggcgcaggcgcccgacgaa
gatctcctcgaggtctcgctgtcgttctcgcagcttcgccaattcctcgagagcccgctg
caggcctcggcgcgctggattctggggcttcgctccgacgacgatcaggacctgctcgac
gtcgaggacgaggtcttcgagtcgtcgtatgtgagctcgcttctcttcgcgcgcgacgtc
ttctgggaaacgatcaccgagcacgcccccgacgataacccggcgttcttgcccatttac
gagcagaaggcgcgctacctcgaactcaaaggcgagctccccaccgggccgtttcacgaa
ggtgagcgcaaaaagcagttggagcttctggagacgtggcgcgccaacctcgccaagctg
ggcgtgcccggcgaggctccgctcgaggtcaagcgcatcgggcgcgccgagcgccacgcg
ccgttagacgagatctgggattccatcagcttcgagttggtcctcgacgaccaacccgtc
cgcgtcgagctctacggcgagaccgaagccctcgataacacacacggcaccgccgtcacc
ctcgtctcgcgcagccgcgtcaaagacaaggacttcctgcgcggcttcttcacgcaggta
ggcctcgccgccagcggcaaaatcgatgaagatcgccccttcgacctggtcgtcgccccc
ggaaagtcgctcgcgcgggcccgcaagctgtcgaaatacaaaaagcgcctcgcccccatc
agccaggccgacgcgctggcgtacctcgagacgctcactgccgacttcttgagcggcgtc
cacgcttatttgatgcccatcgaggcggtcttcgagtacttcgaccccgagaacgaaaca
cccttcgacgagctcgtcgagatgcagctcaacaaccgctggagcacgtgcagctccgag
tacggcccggtgcgccagccggcgcgcttcgaggccccgcaggacgccgaccgattgctt
caacgacggtatgcgccgttctttaaacgtttgggcgggggggagtga
DBGET
integrated database retrieval system
