Persicimonas caeni: FRD00_14235
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Entry
FRD00_14235 CDS
T06769
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcay03032
]
FRD00_14235
03036 Chromosome and associated proteins [BR:
pcay03036
]
FRD00_14235
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_14235
DNA replication proteins [BR:
pcay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FRD00_14235
Chromosome and associated proteins [BR:
pcay03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FRD00_14235
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FRD00_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
Orbi_VP2
HU-CCDC81_euk_2
TrmB
YtxC
Fn3-I_PB4
Motif
Other DBs
NCBI-ProteinID:
QED33077
LinkDB
All DBs
Position
complement(3825239..3825529)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIEVVAERIDIPKNRAYDVVNAIFDAMKDALLQEDRIELRGFGSFSIREYDARVG
RNPRTGEEVFVDAKKSVHFKVGKELRERVDVLNEYN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaacttatcgaagttgttgccgagcgcatcgatatccccaaaaaccgc
gcctatgacgtggtcaatgcaatttttgatgcgatgaaggacgcgctgctccaggaagac
cgtatcgagctgcgcggctttggaagcttctcgatccgcgagtacgacgcccgcgtgggt
cgcaatccgcgcaccggcgaagaggtcttcgtcgacgccaagaagtcagtgcatttcaag
gtgggcaaggaactgcgcgagcgcgtcgacgtcctcaacgagtacaactga
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integrated database retrieval system
