Persicimonas caeni: FRD00_17305
Help
Entry
FRD00_17305 CDS
T06769
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRD00_17305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_17305
Enzymes [BR:
pcay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FRD00_17305
DNA repair and recombination proteins [BR:
pcay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FRD00_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
OB_YrrC
HHH_5
Viral_helicase1
AAA_11
HHH
SLFN-g3_helicase
Helicase_RecD
PIF1
AAA_28
UvrD-helicase
AAA_22
AAA_16
nSTAND3
HHH_2
T2SSE
TraI_hel_assoc_N
AAA
NACHT
PhoH
UvrD_C
NTPase_1
AAA_29
ABC_tran
DEAD
Mg_chelatase
ATPase_2
AAA_7
AAA_24
TsaE
cobW
AAA_18
RsgA_GTPase
ATPase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QED36136
LinkDB
All DBs
Position
complement(4702047..4704209)
Genome browser
AA seq
720 aa
AA seq
DB search
MIKGTLSKIRFESDNGEFAVCELEMSSGRKVTIVGNIMSSRPGETVEVNGQWQNDARYGR
QFAIDAIRPVPPTTREGIEKYLSSGFVEGIGPVLAERIVDHFGEDTLDLLDENPERITEV
DGIGKVRAKRIMSAWAEQRQVRSVMVFLQSHGVSPGFAVKIWKQYAERSIRIVRENPYKL
AEDIHGIGFKTADAIALEAGLEKDSLARLRAGLLYCLREAHSDGHMYLPLGELKHRAVEI
LGVPDDMLGAAVADLAQDERIVTEPLGDGRPPAVFRAPAYRAELGAARHLGQLVRAEHWL
TFSDLDDKLADIERSMGVELARAQKQAALAIFEHKTVVVTGGPGTGKTTIIRAVVTLAEQ
LDRHVKLAAPTGRAAKRMNEATGRDASTVHRLLEFTPKEGGFKYNEERPLDVDLLIVDEA
SMIDTYLLHAIVRALPESTALLLVGDVDQLPSVGPGNVLGDIIDSDTVEVVRLTEVFRQA
EQSAIVTNAHRINAGQMPVVPQRKAGELVDFYTIAAKSPQEAQEKIIELVSDRVPNAFGY
DPIDEVQILSPMHKGDVGCSALNRKLQARFNPGADALERGSKKWKVGDKVMQIRNNYELE
VFNGDIGQISLINRDDDTVWVNFDGRRVTYDFTDLDELVLAYAITVHKSQGSEYAAVILP
VLTQHYVMLQRNLLYTAVTRAKKLVVVVGSEKAVGIAVRNNRSQLRYTRLDERLREIARK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagggcacgctcagcaagattcgcttcgagagcgacaacggcgagttcgcggtg
tgcgaactcgagatgtcgagcgggcgcaaggtcaccatcgtgggcaatatcatgtcttcg
cgccccggcgagaccgtcgaggtcaacgggcaatggcagaacgacgcgcgctacgggcgc
caattcgccatcgacgcgatccggccggtgccgccgacgactcgcgagggcatcgagaaa
tatctttcgagcgggttcgtcgaggggattgggccggtgctcgccgagcgcatcgtcgac
cacttcggcgaggatacgctcgatctgctcgacgagaatccggagcggatcaccgaggtc
gacggcatcggcaaggtgcgcgcgaagcgcatcatgagcgcgtgggccgagcagcgccag
gtgcgctcggtgatggtttttttgcagtcgcacggcgtctcgccgggttttgcggtcaag
atctggaagcagtacgccgagcgctccatccggatcgtgcgcgagaatccctacaagctc
gccgaggatatccacggcatcggcttcaagactgcggacgccattgcgctcgaggcgggc
ctggagaaggactcgctggcgcgtcttcgcgcggggctcttgtactgccttcgcgaggcc
cactccgacggccacatgtacctgccgctcggcgagctcaagcaccgcgcggtcgagatc
ttgggcgtgcccgacgatatgctcggcgcggcggtggccgacctcgcccaggacgagcgc
atcgtgaccgagcctctgggcgacggacgcccgccggcggtgtttcgcgccccagcctac
cgcgccgagctgggcgcggcgcgccacctgggccagctcgtgcgcgccgagcactggctg
accttctcggacctcgacgacaagctcgccgacatcgagcgcagcatgggcgtcgagctc
gcgcgtgcccaaaagcaggccgcgctggcgattttcgagcacaagacggtcgtcgtgacc
ggcgggccgggcacgggcaagacgacgatcatccgggcggtcgtcacgctggccgagcag
ctcgaccgtcacgtcaagctggccgcgccgacaggccgcgccgccaagcgcatgaacgaa
gcgaccggccgcgacgcgagcacagtgcaccggctgctcgagttcacgcccaaagaaggc
ggcttcaagtacaacgaggagcgccccctcgacgtcgatctgctgatcgtcgacgaggcg
tcgatgatcgacacctatctgctccacgcgatcgtacgcgccctgcccgagtcgaccgcg
ctgttgttggtcggcgacgtcgaccagctcccgagcgtcgggccgggcaacgtgctcggc
gacatcatcgacagcgacaccgtcgaggtcgtgcgcctgaccgaggtctttcgccaggcc
gagcagtcggcgatcgtcaccaacgcccaccgcatcaacgccggccagatgcccgtggtg
ccccagcgcaaggccggcgagctcgtcgacttctacaccatcgccgcgaagagcccacag
gaggcgcaggaaaagatcatcgagctcgtcagcgaccgcgtgcccaacgccttcggctac
gaccccatcgacgaggtccagatcttgtcgcccatgcacaaaggcgacgtgggctgctcg
gcgctcaaccgaaagctgcaggcgcgcttcaaccccggcgccgacgctctcgagcgcggc
tcgaagaagtggaaggtcggcgacaaggtcatgcagatccgcaacaactacgagctcgag
gtcttcaacggcgacatcggccagatctcgctcatcaaccgcgacgacgacaccgtctgg
gtcaacttcgacggccgccgcgtcacctacgactttaccgacctcgacgagctggtgctc
gcctacgccatcaccgtgcacaagagccagggcagcgagtacgccgcggtgatcctgccg
gtgctcacccagcattatgtcatgttgcagagaaaccttttgtacacggcggtcacccgc
gctaagaagctcgtcgtcgtcgtcggcagcgaaaaagcggtcggcatcgccgtgcgcaac
aaccgctcgcagctacgctacacgcgcctcgacgagcgcctgcgcgagatcgcccgtaag
tga
DBGET
integrated database retrieval system
