Persicimonas caeni: FRD00_17405
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Entry
FRD00_17405 CDS
T06769
Name
(GenBank) tetratricopeptide repeat protein
Organism
pcay
Persicimonas caeni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_1
TPR_11
TPR_14
TPR_16
TPR_6
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_17
Zn_ribbon_4
TPR_7
TPR_9
TPR-S
TPR_Slam
ARM_TT21_2nd
ARM_TT21_5th
ARM_TT21_N
PknG_TPR
NatA_aux_su
ARM_TT21
Zn_ribbon_5
Iml2-TPR_39
TPR_10
TPR_15
ARM_TT21_C
GYF_2
YnfU
HEAT_Nup120
TPR_21
TPR_NUP160_120_M
Zn_Ribbon_YjdM
IBR_1
DUF6377
RPN7
DUF6510
Motif
Other DBs
NCBI-ProteinID:
QED33673
LinkDB
All DBs
Position
complement(4733960..4738510)
Genome browser
AA seq
1516 aa
AA seq
DB search
MNITCPSCSAEYEVDSSRVPADGLSMRCPKCSHTFQVDPDDVQDDGGSTLLGASGRSGKV
DRFFVKRPTGKVFGPFDKNAIRMMLEAGKLSGDAEVSADKESWQGLDEIPEFAEYASGGD
DPGMNPGGTMLGGWASSVVDDDEPELPQARPPQLPKAKGDGPGLPAPKGADLPKAKDNGP
GLPAPKGAGLPKPKGDGPGLPKPKGGRPGLPKPKGLNLPKPKGDGPGLPASKDAAGLPAS
KDAAGLPQSKEAGLPQSASTGLPQSASTGLPQAKSGAPDLPASKNGSLPAAKGSDSLPQA
KGEDALPIAQDDDPFSAPLDDEDDLFGAPVDDDADDLFGAPADDEDDLFGAPVDDDEDDL
FGAPGAPVDDDDEDDLFGAPVDDDEDDLFGAPVDDDEDDLFGTPEEDEDDLFGAPDDDDD
LFDAPAAEEDDDDLFAAPVDDDPFGAPDGGADAGFGDEDSEDLFAAPADDDEDDLFEDGG
LEADALFDDGGGEDDDFLSGDASFSFLDDSADAAGDDGGPDDLAGKSGEWGDDLMGSAPA
DDAFDTGRFDDGGGDSWDDDFGGGFDDAGLDDGGLDDDDPFRPASSGPRQPASRGIPAQK
TRDEAVEEDKKRGLTTMIGVPLVALLVIGGAGYGIYSYFFADSGDEVKKVVKDTGPKTVD
MKMASSDNYGDLLAVIDQSKKAKLDAGEEPKLLVVESLFLSRYDDKDVAKHAAKLAKKYA
NASGGWEALARGAYEAQSGSADAARSYLEPLVGESGELGYYAQLMMGVGDVIALEKHLGA
DDAAAPKAENEPGEKETEDAAKKDAAEKGKADGEGAEANGAEEPKQGEVADAEKAGEGAE
KPDDKAAGDKRAEEAPEAKDEPAAKDKQVKKKIAKSTGFDSTAKQLAARARTALKAASEA
NAKAALPHYWLGRLYELGGDRQKAIAAWKSALEKSEQHIASLVDLGEAYYERGDLNNATE
SLEKVLSKFKQLAAANEQARAHHLVGRVHSARQQSEEAIKAYTQALSIDASRTDTLRALA
EEYAAAEKYQEALNFFTSNKNLGEKDPEVMLGIVRSYMGLEKWDEAIRQLEEGEKLFPND
ARFPLYLGKLNRKRGAFFDAQKALQRAVQIDPALLSAHAALAQLAWKVDEDVEKAESHIQ
QIRQQPEQIDAGVATDVAAYFKMSNRRDLAEQWYKASLQRDPNYWPARLALARMYLENGE
DEKALTLLERAKEEGIQDIRLSAYLADAYRQSERFAKAVEQINKVIEQYPKNQEYIFIRG
RIYFDQGNFDTAREDFNKAYELDPRYHDAYFFVGRTAFEQGDYKKAMKIFRHVLDYRPNE
GEFRYWMGRSYEAEERLTQALEEYRKATAVDESYGLTNPQLYVRRGRLLSRLGYSVQGKQ
DIARALELAPDMTEALIAMGEANYGEQNYDEAIENFEDVLEKRPEHAEVQYKLGMALQYT
GKELESVEHLQNAVRYGYDDPEVFRTLGYLYKRMRKNKLAVKSFKEYLKRIATKETVPVA
TKREMLRQIEELGGSL
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaacattacgtgcccctcctgttcggcggaatacgaggtcgactcctcgcgagtaccc
gctgacggtttgtcgatgcgctgcccgaagtgctcccacacctttcaagtcgatcccgac
gacgtccaagacgacggcggctcgaccctgctcggcgcctcggggcgttcgggcaaagtc
gaccgcttcttcgtcaagcggccgacggggaaggtgtttgggcccttcgacaagaatgcc
atccggatgatgctcgaggccggcaaactcagcggcgacgccgaggtctcggcggacaag
gagagttggcaggggctcgatgagatccccgaatttgccgagtatgcctccggcggcgac
gatcccggaatgaaccccggcggcacgatgctcggcgggtgggcctcctcggtcgtcgac
gacgacgagcctgaactgcctcaagcccgtccgccccaacttcccaaagcgaagggagac
gggccagggctgcctgctcccaagggagccgaccttccgaaggcgaaagacaacggcccc
ggtctgccggctcccaaaggcgccggacttcccaagcccaaaggcgatggtcccggactc
cccaaacctaaagggggccgtcccgggctgcccaaaccgaaaggcctcaacctccctaag
cccaaaggcgacggccctggcctgcctgcgagcaaagacgctgccggcctgcccgccagc
aaagacgccgccgggctgccacagtcgaaagaagccggcctgccacagtccgcatcgacc
ggcctgccacagtccgcatcgaccgggctgccgcaagccaaatcgggcgcccctgacttg
cccgcctcgaagaacggcagtcttcctgcggccaaaggcagcgacagtctgccgcaagcc
aaaggcgaggacgccctgccgatcgcgcaagacgatgatccgttcagcgctccgctcgac
gacgaggacgatctgttcggcgctcccgtcgacgacgacgcagacgatctgttcggcgct
ccggccgacgacgaggacgacctattcggcgctcccgtcgacgacgacgaagacgatctg
ttcggcgccccgggcgctcccgtcgacgacgacgacgaggacgacctgtttggcgctccc
gtcgacgatgacgaggacgacctgttcggcgctcccgtcgacgacgacgaagacgaccta
ttcggcacccccgaagaggacgaagatgatctcttcggcgcccccgacgatgacgacgac
ctgttcgacgcgcctgcggccgaagaggacgacgacgatctgtttgccgcgccggtcgac
gatgatccttttggagcaccggacggtggcgcagacgccggctttggcgacgaagactcc
gaggacctattcgccgcgccggccgatgacgacgaggacgatctctttgaagatggcggc
ctagaagccgacgcgctgttcgacgatggcggaggtgaggacgacgactttctgtcgggt
gacgccagcttctccttcctggacgactcggccgatgcagccggagacgacgggggtcct
gacgacctcgccggcaaatcgggtgagtggggcgacgatctgatgggcagcgccccggcc
gacgacgccttcgataccggacgtttcgacgacggtggcggcgattcgtgggatgacgac
tttggcggtggcttcgacgatgccggcctggatgacggtggcctcgacgacgacgatccg
ttccgccccgcctcctctggcccgcgtcagcccgcctcgcgaggcattccggcacaaaag
acgcgcgatgaagccgtcgaagaggacaaaaagcgtggcttgaccaccatgatcggcgtg
ccgttggtcgccctgttggtgatcggcggtgccggctatggcatctactcgtatttcttc
gccgattctggcgatgaggtcaaaaaggtcgtcaaagacaccggccccaagaccgtcgac
atgaagatggcctcctcggacaactacggggatctactggcggtcatcgaccagtcgaaa
aaggccaagctcgacgccggcgaggagcccaagctgcttgtcgtcgagtcgcttttcctg
tcgcgctatgacgacaaagacgtcgccaaacacgccgccaaactcgccaagaagtacgcc
aatgcatcgggcggctgggaagccttggctcgcggagcttacgaagctcaaagcggcagc
gccgacgccgcgcgctcgtacctcgagccgctggtcggtgagtcgggcgagctcggctac
tacgctcagctgatgatgggcgtcggtgacgtcatcgccctcgagaagcacctgggcgcc
gacgatgctgctgcaccgaaggccgaaaacgagccgggtgaaaaggagaccgaggacgcg
gcgaagaaagacgccgccgaaaagggcaaggctgacggtgagggcgccgaagccaacgga
gctgaagagcccaaacaaggcgaggttgccgacgctgagaaggctggcgaaggagctgag
aagccggacgacaaagcggccggcgacaagcgcgccgaagaggcgcccgaagcgaaagac
gagcccgcggccaaagacaaacaagtcaaaaagaagatcgccaagtccacgggtttcgac
agcaccgccaagcaactggccgcccgcgcacgcacggcattgaaggccgccagtgaggcg
aacgccaaggccgccctgccccactactggctcggacgtctgtacgaactcggcggtgac
cgccagaaggccatcgccgcatggaagtcggcactggaaaaatcggagcagcatatcgcc
tcgttggtcgaccttggcgaggcctactacgagcgcggcgacttgaacaacgccaccgag
agcctcgagaaggtgctcagcaagttcaagcaactcgcagccgccaacgagcaggctcgt
gcccaccacctggtcggccgcgtccactcggcacgccagcagagcgaagaggcgatcaaa
gcgtacacccaggcgctgagcatcgacgccagccgcaccgatacgctacgcgcgctggcc
gaggagtatgccgccgccgaaaagtatcaggaggcgctgaacttctttacgagcaacaag
aatttgggcgaaaaggatcccgaggtgatgctcggtatcgtgcgctcgtatatgggcctg
gagaagtgggacgaagcgatccgccagctcgaggagggcgagaagctcttcccgaacgac
gcacgcttcccgctgtacctgggcaagctcaaccgcaaacgcggtgcgttcttcgacgcc
caaaaggcgctgcagcgcgccgtgcaaatcgacccggcgctgctgtcggcccacgcggcc
ctcgcgcagttggcctggaaggtcgacgaagacgtcgagaaagccgaatctcatatccag
cagattcgccagcagcccgagcagatcgacgccggcgtcgccaccgacgtcgccgcctac
ttcaagatgagcaaccgacgcgacctggccgagcagtggtacaaggcatcgctgcagcgc
gacccgaactactggccggctcgcctggcgctggcgcgcatgtacctggagaacggcgaa
gacgaaaaggcgctgaccctcctcgagcgagctaaagaagaggggatccaggacatccgc
ctgtcggcttacctggccgacgcttatcgccagtccgagcgcttcgccaaggccgtcgag
cagatcaacaaggtcatcgagcagtaccccaagaatcaggagtatatcttcatccgcggt
cgcatctacttcgaccaggggaacttcgatacggcgcgcgaggacttcaacaaggcctac
gaactcgaccctcgctaccacgacgcgtacttcttcgtgggtcgtacggccttcgagcag
ggcgactacaagaaggcgatgaagatcttccgccacgttctcgattaccgtcccaacgaa
ggagaatttcgttactggatgggacgttcctacgaggccgaagagcgccttacgcaggca
ctcgaggagtaccgcaaggccacggccgtcgacgagagctacggtttgaccaacccgcaa
ctgtacgtgcgccgcggccgcctgctgtctcgactcggctactcggtgcagggcaagcag
gacattgcccgcgcgctggagttggcgcccgacatgaccgaggcgctcatcgccatgggc
gaagccaactacggcgagcagaactatgacgaggcgatcgagaacttcgaggacgtcctc
gagaagcgtcccgagcatgccgaagtccagtacaagctcggcatggcactgcagtacacc
ggcaaggagctcgagagtgtcgagcacctgcaaaacgcagtgcgctacggctatgacgac
ccggaggtcttccgcacgcttggctatctctacaagcgcatgcgcaagaacaagctggcg
gtcaagtcgttcaaagagtacctcaagcgaatcgccaccaaggagaccgtaccggtggcc
accaagcgcgagatgctccgacagattgaagaactcggcggaagcctgtga
DBGET
integrated database retrieval system