Persicimonas caeni: FRD00_17420
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Entry
FRD00_17420 CDS
T06769
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pcay
Persicimonas caeni
Pathway
pcay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRD00_17420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcay03021
]
FRD00_17420
03019 Messenger RNA biogenesis [BR:
pcay03019
]
FRD00_17420
Transcription machinery [BR:
pcay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FRD00_17420
Messenger RNA biogenesis [BR:
pcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FRD00_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_22
NB-ARC
NTPase_1
AAA_18
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QED33676
LinkDB
All DBs
Position
complement(4741214..4742137)
Genome browser
AA seq
307 aa
AA seq
DB search
MGRRGKRRRGRSRGRGRDKLQRLADRLSDYTPIQPDERIKLETGPDEITGRLIDLIAPLG
KGQRVLVTSPPKAGKTTILQKISQSVRENYPDIHQVALLIDERPEEATDFRRNIPAKVEA
STTDRSPRDHIKLAEKVFRRALQKLLDGQDVLLLLDSITRLARAYNHTASGSGRTLSGGI
TAGALDRPRQLFGAARNLEEGGSLTIVATALIDTGSRMDDVIFHEFKGTGNSELVLDREL
ANRRLYPAVDLGASGTRRELKLLSEVEGHRVPHLRRRIADMGKQDSLKWLLERLDRTHNN
LELLGSI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacgaggaaagcgcaggcgcggacgctcacgcggacgtggacgagacaaactg
caacgattggctgatcggttgtcggattacacgccgatccagcccgacgagcgcatcaag
ctcgagaccggccccgatgaaatcaccggccggctcatcgatctgatcgcgccgctgggc
aaaggccaacgtgtgttggtaaccagcccccccaaagccggtaagacgacgatcttgcag
aagatctcgcaatcggtgcgcgagaactacccggatatccaccaggtagcgctgctgatc
gacgagcggcccgaggaagcgaccgactttcggcgcaatatcccggccaaggtcgaggcg
agcaccaccgaccgctcgccgcgcgaccatatcaagctggccgagaaggtgttccgccgc
gcgctgcagaagcttttggacggccaagacgtgctgctgctgctcgattcgatcacgcgg
ctggcgcgcgcctacaaccatacggccagcggctcggggcgcaccctgtcgggcggaatc
accgccggcgcgctcgatcgaccccgccagttgtttggcgcggcgcgcaacctggaggaa
ggcggaagcctgacgatcgtggccaccgcgctgatcgacaccggcagccgcatggacgac
gtgatcttccacgagttcaagggcaccggtaactccgagctcgtcctcgaccgggagctg
gccaaccgacgcctgtacccggcggtcgacctgggcgcctcgggcacccgacgcgagctc
aagcttctgagcgaggtcgaaggccaccgcgtcccccacctgcgccggcgcatcgccgac
atgggcaagcaggactcgctcaaatggttgctcgagcgcctcgatcgcacccataacaac
ctcgagctgctcggctctatctga
DBGET
integrated database retrieval system
