Persicimonas caeni: FRD00_19760
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Entry
FRD00_19760 CDS
T06769
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcay01002
]
FRD00_19760
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcay01011
]
FRD00_19760
Peptidases and inhibitors [BR:
pcay01002
]
Cysteine peptidases
Family C82
FRD00_19760
Peptidoglycan biosynthesis and degradation proteins [BR:
pcay01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FRD00_19760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Phage_Orf51
Motif
Other DBs
NCBI-ProteinID:
QED34119
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Position
5371872..5374145
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AA seq
757 aa
AA seq
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MRSSHPRRKRLSSPSMTRWTIGALLCALIGAGALSSGCNDSARATTEVATPVDPTRVWVE
SFLPNLNTELRRHAEAVATGKALKTYLAREARRSWNARVAGGIKYADLFEKLYDKRDYHK
AFAQSDGMTTRGEAILEVLLDSERHALDSSPYHVARIQTLVANLERVTEGEPAWQGISLT
ADEANELVGWLKAHELDPADPDTRIKVLSALVGASTRGVGNKGVLASPAPRITGQMDQFL
DAFEKSAELTAELELRVADGALRYARDMKHFNLARQDWRDLRDAGGSKALIYGRLEKTYK
ELGKASPTEVKAVMAALAPSHPQYEKLLDVLARYRAIAADGGWERVRPTSLDIGHRSKRV
EALRRRLAAEGFLPSADEQHAAGDNGGRPDPAKPGATGARAARANDDAAAEPAAEAHADV
ETDATDSPQEPDPQVVDEQLVEAVKSYQETHQFRPDGDPTPGVWRSLNLPVSRRIEQIEL
AIQRWRESHYQGEKDFIMVNIPDFHAEVFRGGERAMRFRVVTGNKKRTCNEETGKWEYPN
ATPIQMAELDHVIVNPYWYVPQRIVREELEPKMSRDPDYLEKKNYEKVMMGGKETIRQKP
GDDNALGRVKFIFPNPHNTYMHDTPQKKYFDYPVRAFSHGCMRVHKPFELARHLLENDPN
GKEYDFDELLEKERQKYIELAAKMPVFVEYYTVRVDDQGRPHFLADIYRYDRARLVDDPE
EAEKLADCRVRTRKRKAVEVEEGSDEQPEGVDEDLGP
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgtcgcacccccgccgtaaacgtttgtcctcgccgtcgatgacccgctggacg
atcggcgcgctgttatgcgcgttgatcggagccggcgcgttgtcgagcggctgcaacgac
tctgcccgggccaccacggaggtggccacgcccgtcgatccgacacgggtgtgggtcgag
agcttcttgccgaacctgaacacggaactgcgccgtcacgccgaggctgtggcaacgggc
aaggcgctcaaaacgtatctggcccgcgaggcgcgccgctcgtggaacgcgcgcgtggcc
ggtggcatcaagtacgccgatctgttcgaaaagctctacgacaagcgcgattaccacaag
gccttcgcccagtccgacgggatgaccacgcggggtgaggcgatcttggaggttctgctc
gactcggagcgtcacgcgctcgactcgagtccgtatcacgtcgcgcgcatccagacgctc
gtggccaacctcgagcgggtgaccgagggcgagccggcctggcagggaatcagcttgacg
gccgatgaagccaacgagttggtcgggtggctcaaggcacatgaactcgacccggccgat
cctgacacgcgcatcaaagtgctcagcgcgctggtgggcgcgtcgacccgtggggtgggc
aacaagggcgtgctggcgagtccggcgccgcgaatcaccggccagatggaccaatttctc
gacgcgttcgagaaatcggcggagctgaccgccgagctcgagctgcgggtggccgacggc
gccctccggtacgcgcgcgacatgaagcactttaacctcgcccggcaggactggcgcgac
ttgcgcgacgccggtggttccaaggcgctgatctatggccggctggaaaagacgtataag
gaactgggcaaggcgtcgcctacggaggtcaaggcggtgatggcagccttggcgccgagt
cacccgcaatacgaaaagctgctcgacgtgctcgcccgctatcgcgcgatcgctgccgac
ggtggctgggagcgtgtgcgtcccaccagcctcgacatcggtcaccgctccaaacgcgtc
gaggcgcttcgccggcgcttggccgcagagggcttcttgccgtcggccgacgagcagcac
gccgccggtgacaacggaggtcgacccgatccagccaagcccggcgcgactggagcgcgg
gcggctcgagccaacgacgatgcggctgcagagccggctgccgaggctcacgcggacgtg
gagaccgacgccaccgactcgccgcaggaaccggacccgcaggtcgtcgacgagcaactg
gtcgaggcggtcaagagttatcaggagacgcaccagttccgccccgacggtgatccgacg
cccggggtgtggcgcagcctcaacttgcctgtctcgcgccgcatcgagcagatcgagctg
gccatccagcgctggcgtgagtcgcactaccagggcgaaaaagacttcatcatggtcaat
atccccgactttcacgccgaggtctttcgcggcggcgagcgcgcgatgcgctttcgagtg
gtcacggggaacaaaaagcgcacctgcaatgaagagaccggcaagtgggagtatcccaac
gccaccccgatacagatggccgaactcgaccacgtgatcgtcaatccgtactggtacgtg
ccccagcggatcgtgcgcgaggaactcgagccgaagatgagccgagacccggattacctc
gaaaagaagaactacgagaaagtcatgatggggggcaaggagacgattcgccagaagccg
ggcgacgacaacgcgctgggacgggtgaagttcatcttccccaacccgcacaacacctac
atgcacgataccccacagaagaagtatttcgactacccggtgcgcgcctttagccacggg
tgcatgcgcgtgcacaagccgttcgagctggcacgccacctgctcgaaaacgatcccaac
ggcaaggagtacgacttcgacgaactcctcgaaaaagagcgccagaagtatatcgagctg
gccgcgaagatgccggtcttcgtcgagtactacaccgtgcgcgtcgacgatcagggacgc
ccgcactttttggccgacatctatcgctacgaccgcgcccgcctggtcgatgatcccgag
gaggccgagaaactggccgactgccgcgttcgcacccgcaagcgcaaggccgtcgaggtt
gaagagggctccgacgagcaacccgaaggcgtcgacgaagatctgggcccgtaa
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