Persicimonas caeni: FRD00_21925
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Entry
FRD00_21925 CDS
T06769
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcay03400
]
FRD00_21925
Enzymes [BR:
pcay01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FRD00_21925
DNA repair and recombination proteins [BR:
pcay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FRD00_21925
Prokaryotic type
FRD00_21925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
QED34527
LinkDB
All DBs
Position
complement(5930015..5931490)
Genome browser
AA seq
491 aa
AA seq
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MSTIPKLRINACNDAPIRPERDFVVYWMTAQRRLSYNYALEHAVELAQTHQVPLVIFEPL
RSEYPWASERLHQFVIDGMADKARRLADANVTYFPYLEREHDAGKGLLAALGERAVAVVT
DEFPAFFLPRMTAAAAAQLDVRLEKVDSNGIVPLRAPGKAYKRAYDFRRWFQKHGREHLD
TFPRRHPLVGKQLPQLDRLPAEITDRWPAATLDELADPAFVTTLPIDHDVQPVAAHPGGE
EAARERFQTFLTERLEGYGNRRNYPEDDHTSRLSPYLHFGHISTHEIVGAVLEQERWGFD
DLADNAKGKREGWWGLSEDAESFLEELITWREVSYNTCHYVENYDAWESLPDWAIATLEE
HADDPREHVYTLDEFEKAQTHDELWNASQMQLVKDGRIHNYLRMLWGKKILHWSASPQEA
LAIMIELNNKYALDGRDPNSYSGIFWTLGRYDRPWGPEREIFGKVRYMTSKSTRRKYSVG
RYIEKWVGKGY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatccccaaactccgcatcaacgcctgcaacgacgcccccatccgccccgag
cgcgacttcgtcgtctattggatgaccgcccagcggcggctgagctacaactatgcgctc
gagcatgccgtcgagctcgcccaaactcaccaggtgccgctggtgatcttcgagccgctg
cgaagcgagtatccgtgggcgagtgagcggctgcaccagttcgtgatcgacgggatggcc
gacaaggcgcgccggctcgccgatgcaaacgtgacgtattttccgtacctggagcgcgag
cacgacgcgggcaagggcttgctcgcggcgctcggcgagcgggcggtggcggtggtgacc
gacgagtttccggcgttcttcttgccccggatgaccgcggcggcggccgcacagctcgac
gtgcgcctggagaaggtcgactcgaacgggatcgtgccgcttcgtgcgccgggcaaggcc
tacaagcgggcgtacgactttcggcgttggttccagaagcacgggcgcgagcatctcgac
acgtttccgcgccgccatccgctcgtaggcaagcagttgccgcagctcgaccggctgccg
gccgagatcaccgaccggtggccggcggcgacgctcgacgagctcgccgaccccgcgttt
gtgaccacgctgcccatcgaccacgacgttcaacccgtcgccgcccatcccggcggcgag
gaggcggcgcgcgagcgcttccagacgtttttgaccgagcgcctcgagggctacggcaac
cgacgcaactatccagaggacgaccacaccagtcggctgtcgccgtaccttcacttcggc
cacatttcgacccacgagatcgtgggcgcggtgctcgagcaggagcgctgggggttcgac
gacctcgccgacaacgccaagggcaagcgcgaggggtggtggggtttgagcgaggacgcc
gagtcgttcctcgaagagctcatcacctggcgtgaagtcagctacaacacctgccattac
gtcgagaattacgacgcatgggagtcgctgcccgactgggccatcgcgaccctcgaggag
cacgccgacgacccgcgtgagcacgtctacaccctcgatgagttcgagaaggcgcagacc
cacgacgaactgtggaacgcctcgcagatgcaactcgtcaaagacgggcgcatccacaac
tacctgcggatgttgtggggaaagaagatcctgcactggagcgcgtcaccccaggaggcg
ctcgcgatcatgatcgagctcaacaacaagtacgccctcgatgggcgcgacccgaactca
tatagcgggattttttggacgctggggcgctacgaccggccgtgggggccggagcgggag
atcttcgggaaggtgcggtacatgacctcgaagagcacccgacgcaagtacagcgtcggg
cgctacatcgagaagtgggttggtaagggttactaa
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