Persicimonas caeni: FRD00_24305
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Entry
FRD00_24305 CDS
T06769
Name
(GenBank) tetratricopeptide repeat protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcay01011
]
FRD00_24305
Enzymes [BR:
pcay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FRD00_24305
Peptidoglycan biosynthesis and degradation proteins [BR:
pcay01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FRD00_24305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_19
YfiO
ANAPC3
TPR_7
TPR_16
TPR_14
TPR_1
TPR_2
TPR_18
DASH_Spc34
Motif
Other DBs
NCBI-ProteinID:
QED34973
LinkDB
All DBs
Position
complement(6556336..6558501)
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AA seq
721 aa
AA seq
DB search
MLRFTTIALFLLTATTAHAQLLPESQADTYKTASKLVDEDPAHAYRLAKTLEKLPHADDR
RLALLADAAANAGEVDEAIAALSALGKTAPRALDRLYAHVERGELLLLQGKLDACADAIE
KADEAASALGGRSAEERFFVARRWRLEHDLALARGEDKDLRRAAKAAHKLLTDYPAEPAT
RREGLALSVAELDAEQRFEHARALYDSWAYHDAREEFTALLDDEKYEESARWYLAHLALN
KLRDKPKEAERLFKELAKDGRYREASLYQVARAQMRQERYDDALETLTTYRKRYPRGRHT
ESVYYYRGWLPYDHRENKKAIEGFKNYIKRYGKSARSSYIHGFLAWTYMRLGEWQNAIDT
YEEMRAFGNMLVWGKALYWQAHAFNELGQTKKALAKLDELRETYAVTYYAVLGEQLRARI
EGKDPRASKVWWPDDGGKLDDAPKKSVSDFELRGLSTSEKRTWKRVQALVALGEHHMARG
AIDEIYDDLVRAVPDEQRRAWIHALGHFVENYHHMWEVSTGGSIAAMPAPPEPDSPEAAM
AYPRTYPKVVAEVAEEFDLPPDLMWSLMRQESRYRPAQISYTDAVGALQMIPKTARKVAK
ALGVTYNPRTFPIPEVGFRYSGFYLRKLLDTFDGLIVPTAAAYNSGPQIVAYWFRQNPDA
SFPWLIEEFAYNEGRNYCRKVAEHMVRYLYLYEDDAERRGEILDKLFPVSRDIEIPEEVG
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagattcaccaccatcgccctcttcctcctgacggccaccaccgcccacgcccaa
ctcctccccgagagccaagcggacacctacaagaccgccagcaagctggtcgacgaggac
ccggcgcacgcctacagactcgcgaaaacgctcgaaaagctcccccacgccgacgaccgg
cgcctcgcgctgctcgccgacgcggcggccaacgcgggcgaggtcgacgaggcgatcgca
gccttgagcgcgctcgggaagactgcgccgcgggcgctcgaccggctgtacgcccacgtc
gagcgcggggagctcttgttgctgcagggaaagctcgatgcctgtgccgacgccatcgag
aaggccgacgaggcggccagcgcccttggcgggcggtcggccgaggagcgcttcttcgtg
gcgcgtcgttggcggctcgaacacgacttggcgctcgcccgcggcgaggacaaggacttg
cgtcgcgccgccaaggcggctcacaagcttctgaccgactatccagccgagccggccact
cgacgcgaagggctggcgctgtccgtggccgagctcgacgccgagcaacgcttcgagcac
gcccgcgcgctgtacgacagttgggcgtaccacgacgcccgcgaagagttcacggcgctg
ctcgacgacgagaagtacgaagagagcgcgcgctggtacctggcccacctggcgctcaac
aaactgcgcgacaagcccaaagaggccgagaggctcttcaaagagctcgccaaagacggt
cgttatcgcgaggcgtcgctctaccaggtcgcccgcgcccagatgcgccaggagcgatac
gacgacgcgctcgagacgctgacgacctaccgcaagcgctacccgcgtggccgacatacc
gagtcggtctactactaccggggctggttgccgtacgaccaccgcgagaacaaaaaggcc
atcgagggcttcaagaactacatcaagcggtacggcaaaagcgcgcgctcgtcgtatatt
cacggctttttggcgtggacctacatgcggctcggcgagtggcaaaacgccatcgacacg
tacgaggagatgcgcgcgttcggcaatatgctggtgtggggaaaggcgctgtactggcag
gcgcacgcgttcaacgagttgggccagaccaaaaaggcactcgccaagctcgacgagctg
cgcgagacctacgcggtgacctactacgcggtgctcggcgagcagctacgcgctcgtatc
gagggcaaggatccgcgcgcctcgaaggtgtggtggcccgacgacggcggcaagctcgac
gacgcgcccaagaagtcggtctccgacttcgagcttcgtggactgtcgacgtccgagaag
cgcacctggaagcgcgttcaggcgctcgtcgcgctcggtgagcaccacatggcgcgcggg
gcgatcgacgagatttacgacgacctcgtgcgcgcggtgcccgacgagcagcggcgcgcc
tggattcacgccctgggtcatttcgtcgagaattaccaccacatgtgggaggtctccacc
ggaggcagcattgccgcgatgcccgctccgcccgagccggattcacccgaggcggcgatg
gcttatccgcgcacgtatcccaaggtggtcgccgaggtcgccgaagagttcgaccttccg
cccgatctgatgtggtcgttgatgcgtcaggagagccggtatcgcccggcccagatttcg
tacaccgacgccgtcggcgcgctgcagatgatcccgaagaccgcccgcaaggtcgccaag
gcgctgggcgtgacctacaaccctcgcaccttccccatcccggaggtcggcttccgctac
agcgggttctatctgaggaagctgctcgacacgttcgacgggctcatcgtgccgacggcg
gcggcctacaactccgggccgcagatcgtcgcctattggtttcggcaaaacccggacgcc
tcgttcccgtggctcatcgaagagtttgcttacaacgagggccgaaattactgccgcaag
gtcgccgagcacatggtgcgttatctgtacctgtacgaagacgacgccgagcggcgcggc
gagattctggacaagctgtttccggtatctcgggatatcgagataccggaggaggtgggg
tattga
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