Persicimonas caeni: FRD00_25020
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Entry
FRD00_25020 CDS
T06769
Name
(GenBank) FAD-dependent oxidoreductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcay
Persicimonas caeni
Pathway
pcay00020
Citrate cycle (TCA cycle)
pcay00190
Oxidative phosphorylation
pcay00650
Butanoate metabolism
pcay00720
Other carbon fixation pathways
pcay01100
Metabolic pathways
pcay01110
Biosynthesis of secondary metabolites
pcay01120
Microbial metabolism in diverse environments
pcay01200
Carbon metabolism
Module
pcay_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcay_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FRD00_25020
00650 Butanoate metabolism
FRD00_25020
09102 Energy metabolism
00190 Oxidative phosphorylation
FRD00_25020
00720 Other carbon fixation pathways
FRD00_25020
Enzymes [BR:
pcay01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FRD00_25020
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
GIDA
Lycopene_cycl
ThiF
Motif
Other DBs
NCBI-ProteinID:
QED35108
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Position
complement(6741145..6742899)
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AA seq
584 aa
AA seq
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MPKTHRQHTTVLIIGAGAAGLRTAIELAGAGVECLVLGKRDHGDAHTSWAAGGINASLGN
LDEEDRWEVHAADTIREGHYVCDPTAVELLAKRAPERVCELDEWGAGFARTDNGKINQRY
FGAQTYRRTCFVGDRTGAAILETLVRRARQLDVPYLENVCITHVATDDGRACGAVGFDID
SGEYVAIGARAVVIAAGGCTALYDRSTSRPDENTADAVGLAYRAGAHLRDMEFIQFHPTG
MVEPEDRRGELVTEAVRGEGGHLFNAEGDRFMEEYAPDEMELAARDVVARANAREIRQGR
GTDAGGVLLDISHRDRDFLQERLPSVYERFQDLGIDIAEDPMQVAPTAHYAMGGVCVDFT
TGQSSLDGLYAVGEATSGLHGANRLGGNSLCETVVFGQLCGAHLADALSDEASPNESPNP
SLDDAVIARYTDELDDLADRSGEHRPQDLVAALRRLLWDKAGILRTQEDLEDGLSELSQI
IEKAGDLSVDGGPGSDSFQWAVNLRFMLVGAEAIFRGALMREESRGAQYREDHPDEADDW
KVNIPYGRSDDGHMELWTREVPEIPEAVQEALEEELKLDYHHLE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagacccacagacaacacaccaccgttctgatcatcggcgccggcgccgccggc
ttgcgtacggccatcgagctcgccggggcgggcgtcgagtgcctggtgctcggcaagcgc
gaccacggcgatgcgcatacgagttgggcggcgggtgggatcaatgcgtcgctggggaac
ctcgacgaggaggatcggtgggaggtgcatgcggccgataccatccgcgagggccactac
gtgtgcgacccgaccgccgtggagttgctcgccaagcgggcgcccgagcgggtctgcgag
ctcgacgagtggggcgcggggtttgcgcgcaccgacaacggcaagatcaaccagcgctac
ttcggcgcgcagacctaccggcgcacgtgctttgtgggcgaccgcaccggcgcggccatc
ctcgagaccctggtgcggcgcgcccggcagctcgacgtgccgtatctggagaacgtctgc
atcacccacgtcgccaccgacgacgggcgcgcctgcggggcggtcggcttcgacatcgac
tcgggggagtacgtggccatcggcgcccgcgccgtggtcatcgccgccggcgggtgcacc
gcgttgtacgaccgcagcacctcgcgccccgacgagaacaccgccgacgcggtcgggctg
gcttaccgagcgggcgcgcaccttcgcgacatggagttcatccagtttcatcccaccggg
atggtcgagcccgaggaccgccgcggtgagcttgtgaccgaggcggtgcgcggcgaaggc
ggccacctgttcaacgccgagggcgaccggttcatggaggagtacgctcccgacgagatg
gagctcgccgcccgcgacgtcgtcgcccgcgccaacgcccgcgagatccgccagggccgc
ggcaccgacgccggcggcgtgctgctcgacatctcccaccgcgaccgcgacttcttgcag
gagcgtctcccgtcggtctacgagcgcttccaggacctcggcatcgatatcgccgaagac
ccgatgcaggtcgcccccaccgcccactacgccatgggcggcgtctgcgtcgacttcacc
accggccagtcgagcctcgacgggctatacgccgtcggcgaggcgacgtcggggctgcac
ggggccaaccgcctgggcggcaactccctgtgcgagaccgtcgtcttcggccaactctgc
ggcgcccacctcgccgacgcactctccgacgaggcctcacccaatgagtcacccaacccc
tccctcgacgacgccgttatcgcccgctacaccgacgagctcgacgatctcgccgaccgc
agcggcgagcatcgcccgcaggatctagtcgccgcgctgaggcgcttgttgtgggacaag
gcgggcatcctgcgcacgcaggaggacctggaagacgggctctcggagctgtcgcagatc
atcgaaaaggccggcgacctcagcgtcgacggcggccccggctccgacagcttccagtgg
gcggtcaacctgcgcttcatgctcgtcggcgccgaggccatctttcgcggcgcgctgatg
cgcgaggaatcacgcggcgcgcaataccgcgaggaccaccccgacgaagccgacgactgg
aaggtcaatatcccgtacggacgcagcgacgacggccacatggagctgtggacccgcgag
gtgcccgagatccccgaggcggtgcaagaggcgctcgaagaggagctgaagctcgactat
caccacctggagtag
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