Persicimonas caeni: FRD00_25885
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Entry
FRD00_25885 CDS
T06769
Name
(GenBank) OmpA family protein
KO
K20276
large repetitive protein
Organism
pcay
Persicimonas caeni
Pathway
pcay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRD00_25885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
OmpA
Cadherin_4
TSP_3
He_PIG
Motif
Other DBs
NCBI-ProteinID:
QED35269
LinkDB
All DBs
Position
complement(6952851..6957299)
Genome browser
AA seq
1482 aa
AA seq
DB search
MIYDGEGGLQTPLTRFSNTMTAAGAAGVDRSTTLGDLSSYRILVLLLNQNLSATSRAKIT
AFYEAGGWVIGAVDAENFSPSAITAYNALTQDLGLGIVYAGGTFAPGCQSATHVEPHPLT
AGVSSYRTGWASALSNITPLMRIPSGGDAFVGVSERYVAIADTNFLSDGSCHDGTADNDT
FFENLWDVAQLEVVLTGPSSVPEAGSQTYSASCTSGCGQISWDLDCAAGFTYDEATGNTA
VFDASAIDGAASCVIGVRTCWSNGFCLSDSHTVDVRNVAPSFTSTPPTSATVGQAYTYTM
SATDRAGAADPLTFAVSSAPTGLTLTGTTLQWTPACDHVGPQNVAVTVADDEGGSTDQNF
QVGVSDVDTDADSVGDCVDNCPSTPNPTQADADADGIGNACEGDDDNDGVADGADNCPLV
ANPAQVDTDSDGAGDACDADDDNDGVADAGDSAPRDPTRCTDRDGDTCDDCSQGVDGFGP
RPDNQPANDGPDSDADGVCDAGERAPVAADDAYTTDEDVALSVSAPGVLANDTDANGDAL
SATLQADVSFGTLTLAADGSFTYAPNPGFYGVDTFTYRATDGDADSNVATVTITVTEVNH
APTFVAPTPTDGQVYRLVEGDVLAMQLTARDIDSGDTLSYAVTPLPAGAAFDPSTGAFGW
TLTWRDAGTHALALQVTDDVGAGDTRGVVVEVDFIDADGDGVPDTWETDNGLDPGTIDSD
GDGIADGDEIGDDLDSPDDTDSDGIIDAVDEDSDDDGVPDSEEAGDDDPATAPVDSNEDG
VPDYKDVDSDDDSVPDGADNCRRVYNPGQGDIDGDGLGDACDRDSGGDAGDTGDAGDTGD
AGGWPDVGPDAGPDAGNDAGTDAGPDAGADAGPDAGGPGPDAGGDAGWTPDGSTDAANVR
DLESRGSGWSCDSTGGSAPGASLWLLVLLAAALFWRRRSTGARAVTLGAALLFAAPVLWL
PSSARAQEGYNILTFRPTGLDSGGIAVEGSDPIEAFEYRVGLTYSYANLPVQLLDRASPD
DELIPLVRSSQVLHLRATVGLADDLAATLVAPMLAAQDVDATLTPVGTSGLGDVALLAKY
SLLDRYDDAVGLAALVIVRFPTGDSQALASANGLSGGVNLIVDRQFGPLAAIVNVGYGYT
PEQRFKGSVQRDAVTFGLGTRTDIFDDHLQAIVEWAGHYSLANARTGQQVSAGLATRIGS
VQASIGGGPGIGLETGTPDWRALVDIAYVGTASRVDRPDRIVEPSKLCDVPANYDGPLDA
DGCPILDTDGDGLVDRDDRCVDQPEDFDGFADDDGCPDTDDDADEIVDADDECPREAEDR
DGFADEDGCPDPDNDGDSIVDYDDKCPDEAETINRFQDEDGCPDTFKKGAVLTVYSLRFR
EGSDLLIPGSEKVLDELIGVLKENPTMRIRIEGHADYIGHKADNLELSRKRTRTVVRYLW
AAGIAKDRVPYVGYGESRPLIDEYTDEARAKNRRVEFRVLEE
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatgacggtgaaggtgggctgcagactccgctgacccggttttcgaacacgatg
acggcggcgggagcagccggcgtggaccgctccaccaccctgggcgacctgtcgagctat
cgaatcctggtcttgctgctcaaccagaacctctcggcgacgagccgcgccaagatcacc
gcgttctacgaagccggcggctgggtcatcggagccgtcgacgccgagaatttctcgccg
agcgccatcaccgcctacaacgcgctgacccaagacctcggcctgggcatcgtctacgcc
ggcggcaccttcgcgccgggttgccagagcgcgacccacgtcgagccccacccgctgacc
gcaggcgtcagctcctaccgaaccggatgggccagcgcgctctccaacatcaccccgctc
atgcgcatcccgtcgggcggcgacgccttcgtgggcgtctccgagcgctacgtggccatc
gccgacacgaacttcttgtcggacgggagctgccacgacggcacggccgacaacgacacc
ttcttcgagaacctgtgggacgtcgctcaactcgaagtcgtcctcacggggccctcgagc
gtccccgaagccggcagccagacctattctgcaagctgcacgagcggctgcggccagatc
agctgggatctcgactgcgccgcgggattcacctatgacgaggcgaccggcaacaccgcc
gtcttcgacgcctcggccatcgacggcgcggcgagctgcgtcatcggcgtgcgcacctgc
tggagcaacggcttttgcctgagcgactcccacacagtcgacgtgcgcaatgtggccccg
agcttcacctcgacgccgccgacctcggcgacggtgggacaagcctatacctacaccatg
agcgcgaccgaccgcgccggcgctgccgacccgctgacctttgccgtgtcgagcgcgccc
accgggctcaccctcaccggaaccacgctgcaatggacgccggcctgcgaccacgtcggc
ccccagaacgtcgcggtgaccgtcgccgatgacgaaggcgggagcacggaccagaacttc
caggtgggcgtctcggacgtcgacaccgacgccgactcggtcggcgactgtgtcgacaac
tgcccgagcacgcccaaccccacgcaagccgacgccgatgccgacggtatcggcaatgcc
tgcgagggtgacgatgacaacgacggcgtcgccgacggcgcagacaactgcccgctcgtc
gccaaccccgcccaagtcgacaccgattcggacggcgcaggcgatgcgtgcgacgccgat
gacgacaacgacggcgtcgccgacgccggcgactcggccccacgcgaccccacacgttgc
acagatcgcgacggcgacacctgcgacgactgctcgcagggcgtcgacggctttggccct
cgccccgacaatcagcccgctaatgacggccccgactcagacgccgacggcgtctgcgat
gccggcgagcgcgcccccgtcgccgccgatgacgcgtacactaccgatgaagacgtggcc
ctgtctgtctccgcgccgggcgtcctcgcaaacgacaccgacgccaacggcgacgcgctc
agcgccacgctgcaggccgacgtctccttcggcaccctgaccctcgccgccgacggctcg
ttcacgtacgcgcccaatcccggcttctacggcgtcgatacgttcacctaccgggcaacc
gacggcgacgcggactcgaacgtggcgacggtgacgatcacggtgaccgaggtcaaccac
gcccccaccttcgtcgcccccacgcccaccgacggacaggtatatcgcctcgtcgaaggc
gacgtgctcgccatgcagctcaccgcccgagacatcgactccggcgacacgttgtcctac
gcggtcacgcccctgcccgccggcgcggcgttcgatcccagcaccggcgcctttggctgg
acgctcacctggcgcgacgccggcacccacgcgctggccctgcaggtcaccgacgacgtc
ggcgcaggcgacacgcgcggcgtggtcgtcgaagtcgacttcatcgacgccgacggcgac
ggcgtgcccgacacctgggagaccgacaacggcctcgaccccggcaccatcgactccgac
ggcgacggcatcgccgacggcgacgagatcggcgacgacctcgacagccccgacgacacc
gactccgacggcatcatcgacgcggtcgacgaggactccgacgacgacggggtgcccgac
agcgaagaagccggcgacgacgaccctgcgaccgcgccggtcgactcgaacgaggacggc
gtgcccgattacaaggacgtcgactccgacgacgactcggtccccgacggcgcggacaac
tgccgacgcgtctacaaccccggtcaaggggacatcgacggagacggcctgggtgacgcg
tgcgatcgagactcgggaggcgacgccggagacactggagacgctggcgatacgggagat
gccggcggctggcccgatgtaggacccgacgcaggaccggacgccggaaacgatgccggg
actgatgcaggacctgacgcaggcgccgacgccggaccggacgcaggtggccccggcccc
gacgcgggcggcgacgccggttggaccccggatggctcgaccgacgcggccaacgtgcgc
gatctcgaatcgagaggctccggctggtcctgcgactcgaccggcggctcggcccccggc
gcgagcctgtggctgctcgtccttcttgcagccgccctcttctggcgtcgccggtcgacc
ggcgcgcgcgcagtcacgctcggcgccgccctgctcttcgctgcgcccgtcttgtggctg
ccgagcagcgcacgggcccaggagggctataatattctgaccttccggcccaccggcctc
gactcgggcggcatcgccgtcgagggctccgaccccatcgaggccttcgagtaccgcgtc
ggcctgacctacagctacgccaacctgccggtgcagctgctcgaccgcgcctcgccggac
gacgagctcatcccgctcgtacgcagcagccaggtcttacaccttcgcgccaccgtcggc
ctggccgacgacctcgcggcgacactcgtcgcccccatgctcgccgcccaggacgtcgac
gcaactctgacgcccgtgggcaccagcgggcttggcgacgtggcgctgttggccaaatac
agcctgctcgatcgctacgacgacgccgtcggcctggccgccctggtcatcgtgcgcttc
cccaccggtgactcacaggcgctcgcctcggctaacggactctccggcggcgtgaacctc
atcgtcgaccgtcaattcggccccctggccgccatcgtcaacgtcggctacgggtacacc
cccgagcagcgcttcaaagggagcgtgcagcgcgacgcggtgaccttcgggctgggcacg
cgcacggacatcttcgacgaccaccttcaggccatcgtcgagtgggcgggtcactactcg
ttggcgaacgcccgcacgggccagcaggtgagcgccggtctggcgacgcggattggatcg
gttcaggcgagcatcggcggtggcccgggcatcggcctggagacgggcacgcccgactgg
cgcgccctggtcgacatcgcctacgtgggaacggccagccgcgtcgaccgccccgataga
atcgtcgagccgtcgaagctgtgcgacgtcccggccaactacgacggccccctcgacgcc
gacggctgccccatcctggacaccgacggcgacggcctggtcgaccgcgacgaccgctgc
gtcgaccagcccgaagacttcgacggtttcgccgacgacgacggctgccccgacaccgac
gacgacgccgacgagatcgtcgacgccgacgacgagtgcccgcgcgaagccgaagaccgc
gacggcttcgccgacgaggacggctgccccgaccccgacaacgacggcgacagcatcgtc
gactacgacgacaaatgccccgacgaagccgagacgatcaaccgcttccaagacgaagac
ggctgccccgacaccttcaaaaagggcgcggtgctcaccgtctactccctacgcttccgc
gagggctccgacctgctcatccccggctccgaaaaggtgctcgacgagctcatcggcgtg
ctgaaggaaaaccccacgatgcgcatccgcatcgagggccacgccgactatatcggccac
aaggccgacaacctcgagctgagccgcaagcgcacccgcacggtggtgcgctacctgtgg
gccgccggcatcgccaaggaccgcgtgccctacgtcggctacggcgagagccgcccgctc
atcgacgagtacaccgacgaggcgcgggcgaagaaccgacgtgtggagtttcgggtgttg
gaggagtga
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