Persicimonas caeni: FRD00_26895
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Entry
FRD00_26895 CDS
T06769
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pcay
Persicimonas caeni
Pathway
pcay00860
Porphyrin metabolism
pcay01100
Metabolic pathways
pcay01110
Biosynthesis of secondary metabolites
pcay01120
Microbial metabolism in diverse environments
pcay01240
Biosynthesis of cofactors
Module
pcay_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FRD00_26895 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcay04147
]
FRD00_26895 (hemB)
Enzymes [BR:
pcay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
FRD00_26895 (hemB)
Exosome [BR:
pcay04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRD00_26895 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
QED35461
LinkDB
All DBs
Position
complement(7241533..7242516)
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AA seq
327 aa
AA seq
DB search
MSERFDLPRRPRRLRRNENIRSLVRETHLSKDDLIMPVFITAEENVKNEISSMPGIYQYS
LDRVDEELETLVERGITRVILFGIPESKDEVGSDTWHEHGVMQEAVRHIKKQHPEMYVIT
DVCFCEYTSHGHCGVVDEEGNLLNDPTLANLQKQAISHAEAGADMVAPSGMLDGMIKAMR
TGLDEAGHAEMPIMSYAVKYASAFYGPFRDAVDSSPRFGDRRAYQMDPPNTREAMVEAAL
DVEEGADILMVKPALSYMDVIQKVRERFELPVAAYNVSGEYAMVKAAAEKGWIDGDAVAY
EKLLSMKRAGADIILTYFARDLAPMLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgattcgacctgcccagacgccctcggcggcttcgccgcaacgagaatatc
cgcagcctcgtgcgtgagacgcacctgagcaaagacgacctcatcatgccggtgttcatc
accgccgaggagaacgtcaaaaacgagatctcgtcgatgcccggcatctaccagtactcg
ctcgaccgggtcgacgaagagttggagacgctcgtcgagcgtgggatcacgcgggtgatt
ctgttcgggattcccgagtccaaagacgaggtcggctcggatacatggcacgagcacggg
gtgatgcaagaggcggtgcgccacatcaaaaagcagcacccagagatgtacgtcatcacc
gacgtgtgcttctgcgagtacacctcgcacgggcactgcggcgtggtcgatgaggagggg
aacctgctcaacgacccgacactggcgaacctgcaaaagcaggcgatctcgcacgccgag
gccggcgccgacatggtcgccccgtcgggcatgctcgacggcatgatcaaggcgatgcgc
accggcctcgacgaggcggggcacgccgagatgccgatcatgagctacgcggtcaagtac
gcctcggcgttctacgggccgttccgcgacgcggtcgactcgagcccgcgcttcggcgac
cggcgcgcctaccagatggatccgccgaatacccgcgaggcaatggtcgaggcggcgctc
gacgtcgaggaaggcgccgacatcctgatggtcaagccggcgctgtcgtatatggacgtc
atccagaaagtgcgggagcgcttcgagctgcccgtggccgcctacaacgtctcgggcgag
tacgcgatggtcaaagcggcggccgagaaaggctggatcgacggcgatgccgtggcctac
gagaagctcctgtcgatgaagcgcgccggggcggacatcattctgacgtatttcgcgcgc
gatcttgcgccgatgctcggttga
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