Persicimonas caeni: FRD00_27015
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Entry
FRD00_27015 CDS
T06769
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcay03016
]
FRD00_27015 (truB)
Enzymes [BR:
pcay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRD00_27015 (truB)
Transfer RNA biogenesis [BR:
pcay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRD00_27015 (truB)
Prokaryotic type
FRD00_27015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QED35485
LinkDB
All DBs
Position
7268581..7269468
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AA seq
295 aa
AA seq
DB search
MDGLLLVDKPTGMTSFDVIRNIRRVANTRKIGHTGTLDPQASGLLPLVVGRCTKLANFLS
LDVKEYDFEMELGVETETGDVEGEAVRECPWEHVSEEAIREACEQFIGEIEQVPPIYSAV
KVNGKRAYELARKGEEFELEPRPVTIESLSLVSFEPPRAKLHTRCGSGTYVRALVRDLGG
ALGSCAYTTAIRRTVVGRFSLDEATPLAEITPENFSDLLLPPIELMREFPTYTVDESMCL
ALGYGQNIQPERLDVDVDSFVAVANEAGELVAVTVARETEEGLALRPKRVLKPQH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggatggtctattgctcgtcgacaagccgaccgggatgaccagcttcgacgtcatccgc
aatattcggcgcgtggcgaatacccgcaaaatcggacataccggcacgctcgacccacag
gcgagcgggctgcttccgctggtggtgggccggtgcaccaaactggccaacttcttgagc
ctcgacgtcaaagagtacgatttcgagatggaactcggcgtcgagaccgaaacgggtgac
gtcgagggcgaagccgtacgcgagtgtccgtgggagcacgtaagcgaagaggcgatccgc
gaggcctgcgagcaatttattggtgagatcgagcaggtgccgccgatctattcggcagtc
aaggtgaacggcaagcgcgcctatgaactcgctcgcaagggcgaagagttcgaactcgag
ccgcgaccggtgaccatcgagtcgctaagcctcgtgagcttcgagcccccccgagccaag
cttcacacacgctgcggctcgggaacctacgtgcgcgccttggtgcgcgatctcggcggc
gcgctcggctcgtgtgcgtacaccacggcgattcgccgcacggtggtcgggcgcttttcg
ctcgacgaagcgacgccgcttgcagagattacccccgagaacttctccgatctcttgctc
cctcccatcgagttgatgcgcgagtttccgacctacaccgtcgacgaatcgatgtgtttg
gcgttgggctacggccaaaatatccagcccgagcggctcgacgtcgacgtcgacagcttc
gtcgccgtcgccaatgaggccggcgaactagtcgcggtgaccgtggcgcgtgagaccgaa
gagggcctggcgttgcgacccaagcgcgtgctcaaaccccagcattga
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