Persicimonas caeni: FRD00_28845
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Entry
FRD00_28845 CDS
T06769
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcay
Persicimonas caeni
Pathway
pcay00300
Lysine biosynthesis
pcay00470
D-Amino acid metabolism
pcay01100
Metabolic pathways
pcay01110
Biosynthesis of secondary metabolites
pcay01120
Microbial metabolism in diverse environments
pcay01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRD00_28845 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FRD00_28845 (dapF)
Enzymes [BR:
pcay01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FRD00_28845 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF2826
Motif
Other DBs
NCBI-ProteinID:
QED36202
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Position
complement(7753897..7754718)
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AA seq
273 aa
AA seq
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MKSFPIFKYHGLGNDFVVVREADAPDVEAHVEALCDRNRGVGADGVLVLSEFEDAQARMV
IFNRDGSRPEMCGNGVRCVVRHLVQVEGFCADALTIVSDAGPRPCRVEEQGAGTWQVAVE
MGEAKLDAEPAHVDHDGFTAELVKVDMGNPHAVTFQAAPIETIDAIGELLNAAHPEFPEG
VNVEFVEQTGPQAIRVDVYERGVGRTQACGTGACAAAVAAIDAGLCHADAPVEVELPGGV
LRIELRDGVVWMTGPVEYVFCGEITDDWLTSQR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtcctttccgatcttcaaataccacggtcttggcaacgactttgtcgtggtgcgc
gaagccgacgcccccgacgtcgaagcccatgtcgaggcgctgtgcgaccgcaaccgcggc
gtcggcgccgacggcgtgctcgtgctctccgagttcgaagacgctcaggcgcgcatggtc
atctttaaccgcgatggctcgcgccccgaaatgtgtggaaacggcgtgcgctgcgtggtg
cgccacctggtgcaagtcgaaggtttctgtgccgacgcgctcaccatcgtgtctgacgcc
gggccgcgcccgtgtcgcgtagaagagcagggcgcaggcacctggcaggtcgccgtcgaa
atgggcgaggccaagctcgatgccgagccggcacatgtcgaccacgacgggttcacagcc
gaattggtcaaggtcgacatgggaaacccgcacgcggtgacctttcaggcagcccccatc
gagaccatcgatgcgatcggcgagctactcaacgcagcacaccccgagtttcccgagggt
gtcaacgtcgagttcgtcgagcagaccggcccgcaggcgattcgcgtcgacgtctacgag
cgcggcgtggggcgcacccaggcatgcggcacaggcgcttgcgccgcggccgtggctgcc
atcgacgccggtctttgccacgccgacgcccccgtcgaggtcgaacttcccggcggcgtg
ttgcgcatcgagcttcgcgacggcgtcgtctggatgacgggaccggtcgagtacgtcttt
tgcggcgaaatcaccgacgactggctgacttcacaacgctaa
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