Piscinibacterium candidicorallinum: ACMDW7_01925
Help
Entry
ACMDW7_01925 CDS
T10926
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcaz Piscinibacterium candidicorallinum
Pathway
pcaz00300
Lysine biosynthesis
pcaz00470
D-Amino acid metabolism
pcaz01100
Metabolic pathways
pcaz01110
Biosynthesis of secondary metabolites
pcaz01120
Microbial metabolism in diverse environments
pcaz01230
Biosynthesis of amino acids
Module
pcaz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACMDW7_01925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACMDW7_01925 (dapF)
Enzymes [BR:
pcaz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACMDW7_01925 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XOD97218
LinkDB
All DBs
Position
415865..416716
Genome browser
AA seq
283 aa
AA seq
DB search
MRLQFTKMQGAGNDFVVLNALQRPLDLSADQFRRLADRRFGVGADQFLIVGPPADPAHDF
SYRIVNADGGEVEHCGNGARCFVRYVREKGLTSKASVLVEVSFGVIELTEAADGSVTVQI
AVPRFAPADIPFNPNGLSTRSQGASTLYGLPVGEHTRWVGVANLGNPHAVQVVDDVDRAP
VELEGPLIEAHAAFPARVNAGFMQIIDSQHIRLRVFERGVGETLACGTGAVAAVVCGIQQ
GLLKSPVTVEARGGVLAVRWAGQGEMAYLSGPAVTVFEGEVDL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcagttcacgaagatgcagggcgccggcaatgactttgtcgtgctcaatgca
cttcagcggccactcgatctgagcgccgatcaattccgcaggctggccgaccggcgcttt
ggcgtgggcgcagaccagttcctgatcgtgggcccgccggccgatcccgcccacgacttt
tcctatcgcatcgtcaatgccgatggcggcgaggtggagcattgcggcaatggtgcgcgc
tgctttgtgcgctacgtgcgcgagaagggcctgacgagcaaggccagcgtgttggtggag
gtgagcttcggcgtgatcgagctcaccgaggcagcagacggcagcgtgaccgtacagatt
gccgtgccgcgctttgcgccggccgacattcccttcaacccgaacggcctgagcacacgc
agccagggtgcgagcacgctctatggtttgccggtgggtgagcacacgcgctgggtgggc
gtagccaatctgggcaacccgcatgccgtgcaggtggtggacgacgtggaccgcgcaccg
gtcgagctcgaaggcccgctgatcgaggcgcatgccgcctttccggcgcgggtcaatgca
ggcttcatgcagatcatcgattcgcagcacatccgcctgcgcgtattcgagcgcggcgtg
ggcgaaaccctggcctgcggcacgggcgcggtggcggcggtggtgtgcgggattcaacag
gggctgctgaagagcccggtcacggtggaggcgcgcggtggcgtgctggccgtgcgctgg
gccgggcagggcgagatggcatatctgagcggtccggccgtgaccgtgtttgagggggaa
gtggatctatga
DBGET
integrated database retrieval system