Piscinibacterium candidicorallinum: ACMDW7_04490
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Entry
ACMDW7_04490 CDS
T10926
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pcaz Piscinibacterium candidicorallinum
Pathway
pcaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACMDW7_04490 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaz03400
]
ACMDW7_04490 (recB)
Enzymes [BR:
pcaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACMDW7_04490 (recB)
DNA repair and recombination proteins [BR:
pcaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACMDW7_04490 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
DUF3775
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XOD97693
LinkDB
All DBs
Position
complement(989770..993417)
Genome browser
AA seq
1215 aa
AA seq
DB search
MNGELDPVNCELSGVSLVEASAGTGKTWNICGLYARLLLERSLTVEQILVVTFTQAATAE
LRDRIRNRLQALRSAVHAPEAADPLSVALLDRLRIKQGRTEEQLHHALDRALLEFDNASI
TTIHGFCQRALGDVPLSMGEPLVQDLTESDEELVDEVAWAMWRERIAPTPPDAALARWVW
QEGLTADDVASALRLHESKPASMVRWPDVRLPTEPGNWSNLVARAQSVWNADQLTALLTQ
ASAADHLNRTRIKPEHLPDRLSRAVRDWHSLLAEHTAPARHPQDGELRLFSRAYLDASCK
KSAPRITHPFLDAAQALLDELEQRSADGRAAWLRALQQMLAEGHTRLRALKHVRRLQSFD
DLLGRLREALLGTRGAQLAHSLRTRFPAALIDEFQDTDPVQYDIFRSIYSNTALPLFLVG
DPKQAIYSFRNADLNVYLRAAASAQRRHSLIRNFRSSQGLIAALNALWGGPRQPFLIEGL
GYHPIEAAGARIGTLHDSSGGPTAPLQLRRWAPPQEGQPGGKSVAKAQVCRDVATEIVRL
LVAADRGTLRIDDRPVAPADIAVLVRTRAQGQMIKLALAQAGVGSVELARESVFGSALAR
DLAQVLRGIIEPGDLTRVRTALATRLIGLDATALFALAESADGLLSWSAQFRQWQNLWRQ
RGVGAMLRELGAQTRVAPRLMSTSDGDRQLTNLRHLIDLLAQQAARGLTPAALLRWFLRQ
VHEPPALEAAQLRLESDEHLVQIVTVHRSKGLEYPIVFCPFEWDDSRPPGAKALSTQWRD
DEVHVIDYRNSDEGLPRAAENQRKLEEASERLRLSYVALTRAALRCYIYGGIYRIGNSTT
TACKAKINWLVLGDTLDVLAWTSKPPSVDAIEDAWTRLAERCDSIHLSRMVPRGALPFWP
GQSKQISFEALAPPRRIPAPWRVGSYTGLVRSRSDHRAVDHDLFGAAAERETMGADTDGH
GLAANDILRFARGAAAGVCIHRALELADFTDRSTWPEAIAQALRETGEPAPLAQEQLLAM
LDAVTCVELLPGLRLDRIEPQRRLNELEFTLPAHSLSPEAAISCLWRHGIEMPQLGFATL
RGYLRGFIDLVFEHEGRFYLLDWKSNHLGDRAKDYDAQALRHAMDSGLYWLQLLLYSVAL
HRFLRHSQPGYDYDTHMGGALYLFVRGVRPGWLMPDGTPCGVQVHRPTRQLIEELSALLD
MPGAAPATSPIETSA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgaactggatccggtcaactgcgagctcagcggtgtgagtctggtcgaagcc
tcggcgggcaccggaaagacgtggaacatttgcggtctctacgcacgtctgctgctcgag
cgatccctgacggtcgagcaaatcctagtcgtcacattcacacaggctgccaccgcggag
ctgcgagaccgaattcgcaatcgacttcaagcccttcgcagcgcggtgcatgcgcctgag
gcagccgaccccctgtcggtcgcactactcgaccggctgcgcatcaagcaaggacgaacc
gaagagcaactccatcacgcacttgaccgggcgctgctcgagtttgacaacgcgagcatc
accacaatccacggcttctgtcagcgcgcgctgggcgacgtacccttgtcgatgggcgag
ccattggtgcaggacctgacggagtccgacgaagaactcgtcgatgaagtggcttgggcc
atgtggcgcgagcggatagcgccaaccccgcctgatgcggcgctggcccgctgggtgtgg
caggaggggctcaccgctgacgatgtggcgagcgccctgcgattgcacgagtccaagccg
gcatcgatggtgcgctggccggacgtgcgtttaccgacagaacccggcaactggtcgaat
ctagtcgcacgcgctcagtccgtctggaatgccgatcagcttacggccctgctcacacaa
gcgtcagcggctgaccacctcaaccgcacccgcatcaagcccgaacatctacccgaccgg
ctgagccgcgccgttcgggactggcactcgctgcttgcagaacataccgcgcctgcgcgg
cacccgcaggacggtgagttgcggctcttcagcagggcgtacctcgatgcctcctgcaag
aagtctgcaccgcgaataacgcatccctttctggatgccgcacaggcgctgcttgatgag
ttggagcagcgtagcgccgacgggcgcgctgcctggctgagagccttgcagcagatgctt
gctgagggccatacccggctgcgtgcgctcaagcatgtgcgccgactgcagtcattcgat
gatctgctaggtcgcctgcgcgaagctctactcggtacccgtggcgcgcaactcgcacat
tcgctgcgcacgagattccctgcagcgctgatcgacgagttccaagacacggaccctgtt
cagtacgacatcttccgcagcatctactcgaacacggcgctgccgctgtttctcgtgggt
gaccccaagcaggcgatctacagctttcgcaatgcggatctgaacgtttacctgcgagcg
gctgcgtcggctcagcgcaggcattcgctgatacgcaatttccggtcgagccaaggcttg
attgcggcactgaatgcgctttggggcggaccgaggcagccatttctgattgaaggcctg
gggtatcacccgatcgaagcggctggtgcgcgcatcggcaccttgcacgacagctccggt
gggccgaccgcgccgctccagctgcgccgctgggcgccaccccaggaagggcagcccggc
gggaagtccgtagccaaggcgcaggtgtgccgcgatgtcgccaccgagatcgtccgcctg
ctggtcgcagcagaccgcggcacgctgcgcatcgatgaccgtcccgttgcacccgcagac
atcgcggtgcttgtgcggacccgggctcagggtcagatgatcaagctcgcgctggcgcaa
gccggggtgggcagcgtcgaactggcgcgcgagagtgtgttcggcagcgccttggcgcgc
gacctcgcgcaggtgctgcgcgggatcatcgagccgggcgatctgactcgcgtacgcact
gcgctggctacccgactgatcggtctggatgccacggcactatttgccctcgcggagagc
gcggatgggctgctgagctggagtgcacagtttcggcaatggcagaacctctggcgccag
cgtggcgtcggtgccatgctgcgcgaactcggcgcgcagacgcgggtggcgccgagactg
atgagcaccagcgatggcgaccggcagctcaccaacctgcgccacttgatcgatctgctg
gcccagcaggcggcgagaggactgacgccagctgcgctgctgcgctggttcctgcgccaa
gtccacgaaccgccagcactggaagctgctcagctgcggctggagtccgacgagcatctt
gtgcagattgtcacggtgcaccggtccaaggggctggagtatccgatcgtgttctgcccg
ttcgagtgggacgacagccggccgcccggcgccaaggcgctgagcactcagtggcgggac
gacgaggtgcacgtgatcgactatcggaactcagatgagggcctgcctcgcgctgcagag
aaccaacgcaagctggaagaggcttccgagcgcttgcggctgagctacgtcgcactcacc
cgcgcggcattgcgttgctacatatacggcggcatctatcgcattgggaacagcacaacc
acggcttgcaaggccaaaatcaactggcttgtgctgggtgacactctggacgtccttgca
tggacatccaaaccgccgtcggtcgacgccatcgaagacgcctggacccgcctggcggag
cgctgcgattcgatccaccttagccgcatggttccgcgtggcgccttgcctttctggccc
gggcagtcgaagcagatctcattcgaagcgctggcaccccccaggcgcattcctgcaccc
tggcgagtgggcagctacacagggcttgtgcgcagccgcagcgatcaccgcgcggtagac
catgatctttttggcgctgctgccgagcgtgagacgatgggtgcagacaccgacggtcat
gggttggcagcgaacgacattctgcgctttgcccgtggcgcggcggctggtgtctgcatc
caccgtgcgcttgaattggccgacttcacagaccgcagcacctggcctgaggccattgcg
caagccttgcgagaaaccggagagcccgcgccgctcgcacaggaacagcttctggccatg
ctggatgccgtcacgtgtgtcgagctgctgccggggctgcgcctcgatcggatcgagccg
cagcggcgcctcaatgaactggagttcactctgcccgcgcattccctgagcccggaagcg
gcaatcagctgcctgtggcgccacggcattgagatgccgcaattgggtttcgccaccctg
cgtggctacctccgtggcttcatcgacctggtcttcgagcatgaagggcggttctacctg
ctcgattggaagtccaatcacctgggagaccgtgcgaaagactacgacgcgcaagcgctg
cgccatgcgatggacagcggactctattggctgcagctgctgctgtacagcgttgccttg
cacagattcctgcgccacagtcagcccggctatgactacgacacccacatgggaggtgct
ttgtatctctttgtgcgcggcgtacgcccaggctggttgatgccggacggcacgccgtgc
ggcgtgcaggtgcatcgcccgacgaggcaactgatcgaggagctctccgcgctgctagat
atgcctggtgcagcacccgccacttcacccatcgagacctcggcatga
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