Piscinibacterium candidicorallinum: ACMDW7_06145
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Entry
ACMDW7_06145 CDS
T10926
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcaz Piscinibacterium candidicorallinum
Brite
KEGG Orthology (KO) [BR:
pcaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcaz03016
]
ACMDW7_06145 (truB)
Enzymes [BR:
pcaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACMDW7_06145 (truB)
Transfer RNA biogenesis [BR:
pcaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACMDW7_06145 (truB)
Prokaryotic type
ACMDW7_06145 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XOD98006
LinkDB
All DBs
Position
1369460..1370383
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AA seq
307 aa
AA seq
DB search
MELQAPTRLAIPARRVERVAVHGVLLLNKPRGLSSNDALQKARRILHAKKAGHTGTLDPE
AHGLLPLCFGEATKFSQDLLDADKTYEASVRFGIKTSTGDAEGEVIATREVTHDQKALQL
ACERFVGPIDQVPPMHSALKQGGVALYELARKGIEVERAARRVQIHAIEVLSQTPDSAVL
RCHVSKGTYIRTLAEDIGEALGCGAHLTALYRTQVGPLSVADAVTLEQLSAVQNPAALLA
PVDSLAQGLHAVRLSENEQDRVRQGQRLIITDDFDGTVRMYGPDGFLGIGQLHQRRLQPT
RVLNLKE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaagctcctacgcgcctggccattcccgcccggcgtgtggagcgggtggcg
gtccatggcgtgctcctgctgaacaagcctcgtggcctgtcgagcaacgatgcgctgcag
aaggcgcggcgcatcctgcacgccaagaaggcgggccacaccggcacgctggaccccgaa
gcgcacggcctgctgcccctgtgctttggcgaggcgaccaagttttcgcaggatctgctg
gacgcagacaagacctatgaggccagcgtgcgcttcggcatcaagaccagcacgggggat
gccgagggtgaggtgatcgccacgcgtgaggtcacgcacgaccagaaggcgctgcagctt
gcttgcgagcgcttcgtcggcccgattgaccaggtgccgcccatgcactcggcgctcaag
cagggcggtgtggcgctgtatgaactggcgcgcaagggcattgaagttgagcgggcggcg
cgccgagtgcagatccatgcgatcgaagtactcagccagacgcccgatagcgcggtgctg
cgctgccatgtgagcaagggcacctacatccgcactctggctgaagacattggcgaggcg
ctcggttgcggcgcgcacctgacggcgctgtatcggacgcaggtcggcccgctgagcgtg
gccgacgccgtcacgctggagcaattgtctgcggtgcagaatcccgcagctctgctcgca
ccagtggacagcctggcgcagggcttgcatgccgtgcgcttgagcgaaaacgaacaggat
cgggtgcgccaagggcagcgcctgatcatcactgacgattttgacggcaccgtgcgcatg
tacgggccggatggattccttggcatcggccagctgcatcagcgccgcttgcagcccact
cgagttttgaacctgaaagagtga
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