KEGG   Piscinibacterium candidicorallinum: ACMDW7_08560
Entry
ACMDW7_08560      CDS       T10926                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pcaz  Piscinibacterium candidicorallinum
Pathway
pcaz03030  DNA replication
pcaz03430  Mismatch repair
pcaz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACMDW7_08560
   03430 Mismatch repair
    ACMDW7_08560
   03440 Homologous recombination
    ACMDW7_08560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcaz03032]
    ACMDW7_08560
   03400 DNA repair and recombination proteins [BR:pcaz03400]
    ACMDW7_08560
Enzymes [BR:pcaz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACMDW7_08560
DNA replication proteins [BR:pcaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ACMDW7_08560
DNA repair and recombination proteins [BR:pcaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ACMDW7_08560
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: XOD98451
LinkDB
Position
complement(1898568..1899209)
AA seq 213 aa
MFDWLLNRAGSNAATEAQRWVVLDVETTGLDSGRDSLLSIGAVALIDGRIDLADSFEIHV
RPPSVSSKDNVLVHGIGHGTQQRAADPKEALPRFLDYIGTAPLVAYHAAFDQAFLARAIK
VQVGLPFSNPWVDLAELAPAALPKVAGEVGGKALDHWLSYFGIPVAGRHTAAGDALATAM
LLQRVLHELPAAQRQNVRRLQALAGAGKWLGAG
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtttgactggctcctcaaccgggcagggagcaatgcggccaccgaggcgcagcgctgg
gtcgtgctcgatgtcgagaccaccggcctggacagcgggcgcgacagcctgctgtcgatc
ggcgccgtggcgctgatcgacgggcgcatcgatctggccgacagcttcgagatccacgtg
cgcccgccgtcggtgtccagcaaggacaacgtgctggtgcatggcattggccacgggacg
cagcagcgcgcggccgaccccaaggaggccctgccgcgctttctggactacatcggcacc
gcgccgctggtggcctaccacgccgccttcgatcaggcattcctggcgcgggccatcaag
gtgcaggtcgggctgccgttctccaacccgtgggtcgatctggccgaactcgcgccggcg
gccctgcccaaggtggccggcgaggtcggaggcaaggcgctggaccactggctgagctac
tttggcatccccgtggcggggcgacacaccgcggctggcgacgcgctggccaccgccatg
ctgctgcagcgcgtgctgcatgaactgccggcggcgcaacgccagaacgtgcggcgcctg
caggccttggccggggcggggaagtggctcggcgcgggatag

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