KEGG   Piscinibacterium candidicorallinum: ACMDW7_10120
Entry
ACMDW7_10120      CDS       T10926                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pcaz  Piscinibacterium candidicorallinum
Pathway
pcaz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACMDW7_10120 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcaz03400]
    ACMDW7_10120 (uvrB)
DNA repair and recombination proteins [BR:pcaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACMDW7_10120 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACMDW7_10120 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C UVR ResIII DEAD AAA_30 Kinesin UB2H AAA_22 FlaG DALR_1 TnsD RapA_C
Other DBs
NCBI-ProteinID: XOD95499
LinkDB
Position
complement(2239729..2241849)
AA seq 706 aa
MSASSSNAPPPAAEAPVEVPVGEFVSYPDSPFRLFQPFPPAGDQPMAIAGLVDGIRDGLS
FQTLLGVTGSGKTYTMANVIAQMGRPALVLAPNKTLAAQLYAEMREFFPQNAVEYFVSYY
DYYQPEAYVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVATVSCIYGIGNPTE
YHAMILILRVGDKLSQRDVITRLVAMQYTRTDLDFTRGNFRVRGDTIDIFPAEHAELAIR
IELFDDQIDSITLFDPLTGRTRQKIPRFTVYPGSHYVTPRATVLRAIETIKDELRERLDF
FVKENKLVEAQRIEQRTRFDLEMLQELGFCKGIENYSRHFSGAKPGDPPPTLIDYLPDDA
LMIIDESHVMMGQLNGMYNGDRSRKQTLVEYGFRLPSAMDNRPLKFEEFERKMPQTIFVS
ATPADYETKRADNTVEQVVRPTGLIDPTVEVRPASTQVDDVLSEIRDRVDKGERVLVTTL
TKRMAEDLTDFLSENGVKVRYLHSDIDTVERVEIIRDLRLGMFDVLVGINLLREGLDIPE
VSLVAILDADKEGFLRSGRSLIQTIGRAARNLNGKAILYGDVVTDSMKAAIEETNRRREK
QVAFNAEHGITPRGVIKQVKELIDGVFNQSDSRKEQKAAEARKSYETLSEKDLGKEIKRL
EKLMMEAARNLEFERAAQLRDQLSVLREQAFGASAEGSVVSLTARR
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgagcgcctcgtcctccaatgcccctccgcccgcagctgaagcacctgtggaggttcct
gtgggcgagttcgtcagctacccggatagcccgtttcgcctgttccagccctttccaccg
gcgggcgaccagcccatggcaatcgccgggctggtggacggcatccgcgatggcctgagc
tttcagaccctgctgggggtgaccgggtcgggaaagacctacaccatggccaacgtgatc
gcgcagatggggcgtccggccctcgtgctcgcgccgaacaagacgctggctgcgcaactg
tatgccgagatgcgggagttcttcccacagaacgcggtggagtacttcgtcagctactac
gactactaccagcccgaagcctatgtgccgcagcgcgatctgttcatcgagaaggacagc
tcgatcaacgagcacatcgagcagatgcggctgtcagcgaccaagagcctgctggagcgg
cgcgacacggtgattgtggccaccgtgagctgcatctacggtatcggcaacccgaccgag
taccacgcgatgatcctgatccttcgcgtgggcgacaagctcagtcagcgcgacgtcatc
acgcgcctggtcgcgatgcagtacacgcgaacggacctggacttcacccgcggaaacttc
cgagtgcgtggcgacacgattgacatctttccggcagagcacgcggaattggccatccgc
atcgagctcttcgatgaccagatcgactccatcaccctcttcgatccgctgaccggccga
acccgccagaagatcccgcgcttcacggtgtacccgggctcgcactatgtcacgcctcgg
gccacggtgttgcgcgcgatcgagaccatcaaggacgagctgcgcgaacggctggatttc
ttcgtgaaggagaacaagcttgtcgaggcgcagcgcatcgagcagcgcacgcgctttgat
ctggaaatgctccaggagctgggtttctgcaagggtatcgagaactacagccggcatttc
tccggcgccaagccaggcgaccctccgcctaccttgatcgactatctccctgacgatgcg
ctgatgatcatcgacgagagtcacgtcatgatggggcagctcaacggcatgtacaacggt
gaccgatcccgcaagcagacgcttgtcgagtatgggttccgactgcccagcgccatggac
aaccggccgctgaagttcgaggagtttgagcgcaagatgcctcagaccatcttcgtgtcg
gccacgccagcggattatgagaccaagcgagccgacaacactgtcgagcaggtggtgcgc
cctacggggttgatcgacccgacagtcgaggtgcgcccggcctccacccaagtggacgac
gtactttccgaaatccgtgatcgagtggacaagggcgagcgcgtgctggtcacgacgctc
accaagcggatggccgaggatctgacggactttctgagcgagaacggagtcaaggtgcgg
tacttgcacagcgatatcgacaccgttgagcgcgtggagatcattcgagacctgcgtctg
ggcatgttcgatgtactcgtcggcatcaaccttctgcgcgaggggcttgacattcctgaa
gtctcgttggtggcgatcctggatgctgacaaggaaggctttctgcgtagcggccgcagc
ctgatccagacgatcggccgggccgcacgcaacctgaacgggaaggcaattctgtacggg
gatgtggtgaccgactcgatgaaggcggcgatcgaggaaaccaaccgccggcgcgaaaaa
caggtggctttcaatgccgagcatggcatcaccccgcgtggcgtgatcaaacaagtcaag
gaactgatcgacggcgtcttcaaccaatccgacagccgcaaggagcaaaaggcggccgag
gcgcgcaagagctacgagacgttgtccgaaaaggatctcggcaaggagatcaagcgcctg
gagaagctcatgatggaagccgcgcgcaatctcgaattcgagcgggctgctcagttgcgc
gatcagctcagcgtgctgcgcgagcaggcgttcggcgcaagtgccgaggggtcagtggtg
tcgctgacggctcgacgttga

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