KEGG   Piscinibacterium candidicorallinum: ACMDW7_15345
Entry
ACMDW7_15345      CDS       T10926                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pcaz  Piscinibacterium candidicorallinum
Brite
KEGG Orthology (KO) [BR:pcaz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcaz02044]
    ACMDW7_15345 (tssC)
Secretion system [BR:pcaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ACMDW7_15345 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: XOD96462
LinkDB
Position
complement(3398872..3400362)
AA seq 496 aa
MAQTQSDSQLGAIEFAGSDFSSLLNKEFKPKTEEVRSEVERAVQTLAEQALVNTSLIGKD
VVQSIEAMIAAIDKKLSEQVNVILHHADFQKMESAWRGLHYLVNNTETDESLKIRVMDIS
KADLHKTLKRYKGTNWDQSPIFKRVYEEEYGQFGGEPFGAIVGDYYFDQSPPDVELLGEM
AKVSASAHAPFLAAASPTLMQMDSWQELANPRDLTKIFSTPDYAGWRSLRESEDARYLAL
CMPRFLARTPYGAKTNPVEDFAFEEDTGAADHSRYAWANAAYAMAVNINRSFKLYGWCSR
IRGIESGGAVEGLPTHAFPTDDGGVDMKCPTEIAISDRREAELSKNGFLALVHRKNSDFA
AFIGGQSLHKPAEYDDPDATANAALAARLPYLFACNRFAHYLKCIVRDKVGSFKERADMQ
RWLQNWIMQYVDGDPANSSEDIKAEKPLAAAEVVVEEIEGQPGYYGAKFFLRPHYQLEGL
TVSLRLVSKLPSAKSA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcacagacccaatcagacagccagctgggtgcgattgaattcgcaggctcggacttt
tcgtcgcttctgaacaaggagttcaagcccaagaccgaagaagttcgcagcgaggtcgag
cgcgcggtgcagacccttgccgaacaggcgctcgtaaacacgagcttgatcggcaaggac
gtggtccagtcgatcgaagcaatgattgctgcgatcgacaagaagctgtccgagcaggtg
aacgtgattctccaccacgccgacttccaaaagatggaaagcgcatggcgcgggctccac
tatctggtcaacaacaccgagacggacgaatccctcaagatccgcgtaatggatatctcg
aaggctgatcttcacaagacgctcaagcgctacaagggcaccaactgggatcaaagcccg
atcttcaagcgggtttacgaagaagaatatgggcagtttggcggcgagccgttcggcgcg
atcgtcggcgactactactttgaccaaagcccgccagacgtggaactgcttggcgagatg
gccaaggtgtctgcatcggcgcatgctccattcctcgccgctgcatcgcccacgctaatg
cagatggactcatggcaggagctggccaatcctcgagatctaacaaagattttcagcacg
ccggactatgccggttggaggtcgttgcgcgagtccgaggacgcgcgctatctggcactg
tgcatgccgcgtttccttgcgcggacaccttacggtgccaagaccaatccggtggaagac
tttgcgtttgaggaggacacgggcgcggcggatcactcgcgctacgcctgggctaatgcg
gcgtatgcgatggcggtaaacatcaaccgctcgttcaagctgtacggctggtgctcccgt
attcgtggcatcgagtcgggcggtgctgtggaagggttgccgacccatgccttcccgaca
gacgatggcggcgtcgacatgaagtgcccgaccgagatcgcaatcagcgatcgacgtgaa
gcagagctgtcgaagaacggcttcctggcgctggtgcaccggaaaaactcggacttcgca
gccttcatcggtgggcaatcgctgcacaagcctgcggagtacgacgatcccgatgcaacc
gccaacgcagcgcttgcggcacggctaccgtacctgtttgcgtgcaaccggtttgcccac
tacctgaagtgcattgttcgcgacaaagtcggctcgttcaaggagcgggccgacatgcag
cgctggctgcagaactggatcatgcagtacgtggacggcgatccggcgaattccagtgaa
gacatcaaggcggagaagccgttggcagctgccgaggttgtggttgaggagattgaaggc
cagccagggtattacggcgccaagttcttcttgcgcccgcactatcagctggaaggcttg
accgtgagcttgcgtttggtgtccaagctgccatccgcgaagtcggcttga

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