Piscinibacterium candidicorallinum: ACMDW7_16060
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Entry
ACMDW7_16060 CDS
T10926
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcaz Piscinibacterium candidicorallinum
Pathway
pcaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMDW7_16060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcaz03021
]
ACMDW7_16060
03400 DNA repair and recombination proteins [BR:
pcaz03400
]
ACMDW7_16060
Enzymes [BR:
pcaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMDW7_16060
Transcription machinery [BR:
pcaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMDW7_16060
DNA repair and recombination proteins [BR:
pcaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMDW7_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XOD96597
LinkDB
All DBs
Position
complement(3565140..3566147)
Genome browser
AA seq
335 aa
AA seq
DB search
MANTPILKPRSIEVESVGPFSAKVTMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVSIA
GVVHEYSTLDGVQEDVVDILLNLKGVVFKLHNRDEATVTLRKSGEGPVLASDIELSHDVE
IVNPEHLIAHLAGGKLEMQIKVEKGRGFVPGNVRAFADDHSKTIGRIVMDASFSPVRRVS
YAVESARVEQRTDLDKLVLTIDTNGAISPEEAVRQSSRILVEQLAVFAALEGQTEAILAE
AAPIVRGATSSSPSVDPILMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPN
LGRKSLNEIKEVLAARGLTLGMKLENWPPAGLDRN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccaataccccgattctcaagccgcgcagcatcgaagtggaatccgtcgggcctttc
tcagcgaaggtcacgatggagccgttcgagcgcggctatggccacaccctgggcaacgcg
ctgcgccgagtgctgctgtcctccatggtcggttatgcgccgaccgaagtctcgatcgcc
ggcgtcgttcacgagtactcgacgctggatggcgtgcaggaagacgtcgtagacatcctg
ctcaacctcaagggtgtggtgttcaagctccacaaccgcgacgaagccaccgtcacgctg
cgcaagtctggtgaaggccccgtgctggcctccgatatcgaactgtcgcatgacgtcgag
atcgtgaaccccgagcatctgatcgcccatctggccggcggcaagctggaaatgcagatc
aaggtggagaagggccgcggcttcgtgcctggcaacgtccgcgcgtttgcagacgaccac
agcaagaccatcggacgcatcgtgatggatgcatccttctcgccggttcggcgtgtgagc
tatgccgtcgagagcgcacgcgtcgaacagcgcaccgatctggacaagctggtgctgacc
atcgataccaacggcgccatctccccggaagaggcggtgcgccagtcgtcgcgtatcctg
gtcgagcagcttgccgtgttcgccgcactggaaggccagaccgaagcgatccttgcggaa
gctgcacccatcgtgcgtggcgccacgagcagctcgccgtccgtggatccgatcctcatg
cgtccggtggacgatcttgagctgacggttcgttccgcgaactgcctgaaggccgaaaac
atctactacattggcgatctgattcagcgcaccgagaacgagctgctcaagacgccgaac
ctgggacgcaagtctctcaatgaaatcaaggaagtgcttgctgcccgtggtctgaccctg
ggcatgaagctcgagaactggccgcccgccggcctcgaccgcaactaa
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